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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020256 Human Papillomavirus HPV33 HQ537707.1
 4153 4154 hg19 chr13 42933311 42933312 q14.11 ENSG00000298154, EPSTI1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020257 Human Papillomavirus HPV33 HQ537707.1
 2456 2457 hg19 chr13 43104952 43104953 q14.11 DNAJC15 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020258 Human Papillomavirus HPV33 HQ537707.1
 2493 2494 hg19 chr3 111774719 111774720 q13.2 PLCXD2, PHLDB2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020259 Human Papillomavirus HPV33 HQ537707.1
 2060 2061 hg19 chr3 111780248 111780249 q13.2 PLCXD2, PHLDB2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020260 Human Papillomavirus HPV33 HQ537707.1
 7541 7542 hg19 chr4 28154182 28154183 p15.1 ENSG00000286321 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020261 Human Papillomavirus HPV33 HQ537707.1
 7465 7466 hg19 chr4 28375992 28375993 p15.1 ENSG00000250038 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020262 Human Papillomavirus HPV16 NC_001526.2
 1297 1298 hg19 chr2 96487974 96487975 q11.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020263 Human Papillomavirus HPV16 NC_001526.2
 1280 1281 hg19 chr2 96487983 96487984 q11.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020264 Human Papillomavirus HPV16 NC_001526.2
 4920 4921 hg19 chr2 105682421 105682422 q12.2 ENSG00000293937, ENSG00000293966 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020265 Human Papillomavirus HPV16 NC_001526.2
 5983 5984 hg19 chr2 105721835 105721836 q12.2 ENSG00000293937 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated