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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020276 Human Papillomavirus HPV16 NC_001526.2
 5258 5259 hg19 chr2 105744284 105744285 q12.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020277 Human Papillomavirus HPV16 NC_001526.2
 2408 2409 hg19 chr2 105745069 105745070 q12.2 NCK2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020278 Human Papillomavirus HPV16 NC_001526.2
 631 632 hg19 chr2 105747201 105747202 q12.2 NCK2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020279 Human Papillomavirus HPV16 NC_001526.2
 5507 5508 hg19 chr2 105749753 105749754 q12.2 NCK2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020280 Human Papillomavirus HPV16 NC_001526.2
 7095 7096 hg19 chr2 105751484 105751485 q12.2 NCK2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020281 Human Papillomavirus HPV16 NC_001526.2
 3439 3440 hg19 chr2 105751558 105751559 q12.2 NCK2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020282 Human Papillomavirus HPV16 NC_001526.2
 7560 7561 hg19 chr2 105752160 105752161 q12.2 NCK2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020283 Human Papillomavirus HPV16 NC_001526.2
 4596 4597 hg19 chr2 105753845 105753846 q12.2 NCK2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020284 Human Papillomavirus HPV16 NC_001526.2
 5880 5883 hg19 chr6 10084257 10084277 p24.3 ENSG00000293385 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020285 Human Papillomavirus HPV16 NC_001526.2
 4815 4816 hg19 chr1 15918634 15918635 p36.13 SPEN Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated