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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020286 Human Papillomavirus HPV16 NC_001526.2
 4334 4335 hg19 chr1 15972796 15972797 p36.13 ZBTB17 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020287 Human Papillomavirus HPV16 NC_001526.2
 128 129 hg19 chr18 35269332 35269333 q12.2 ENSG00000274184, ZNF271P, ZSCAN30 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020288 Human Papillomavirus HPV16 NC_001526.2
 1733 1734 hg19 chr3 181873618 181873619 q26.33 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020289 Human Papillomavirus HPV16 NC_001526.2
 1728 1729 hg19 chr3 181873624 181873625 q26.33 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020290 Human Papillomavirus HPV16 NC_001526.2
 300 301 hg19 chr3 181917538 181917539 q26.33 ENSG00000302744 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020291 Human Papillomavirus HPV16 NC_001526.2
 65 66 hg19 chr4 160621100 160621101 q32.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020292 Human Papillomavirus HPV16 NC_001526.2
 2454 2455 hg19 chr4 160621755 160621756 q32.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020293 Human Papillomavirus HPV16 NC_001526.2
 3376 3377 hg19 chr20 47894938 47894951 q13.13 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020294 Human Papillomavirus HPV16 NC_001526.2
 143 144 hg19 chr2 111907541 111907542 q13 MERTK Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020295 Human Papillomavirus HPV16 NC_001526.2
 5395 5396 hg19 chr1 121743542 121743543 p11.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated