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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020296 Human Papillomavirus HPV16 NC_001526.2
 697 698 hg19 chr13 73354012 73354013 q22.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020297 Human Papillomavirus HPV16 NC_001526.2
 2763 2764 hg19 chr13 73360809 73360810 q22.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020298 Human Papillomavirus HPV16 NC_001526.2
 3761 3762 hg19 chr3 141864366 141864367 q23 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020299 Human Papillomavirus HPV16 NC_001526.2
 2385 2386 hg19 chr3 141864683 141864684 q23 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020300 Human Papillomavirus HPV33 HQ537707.1
 2127 2128 hg19 chr2 92102957 92102958 p11.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020301 Human Papillomavirus HPV33 HQ537707.1
 2045 2046 hg19 chr20 33997778 33997779 q11.22 RALY Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020302 Human Papillomavirus HPV16 NC_001526.2
 3446 3447 hg19 chr13 75029708 75029709 q22.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020303 Human Papillomavirus HPV16 NC_001526.2
 3837 3839 hg19 chr19 2016497 2016517 p13.3 BTBD2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020304 Human Papillomavirus HPV16 NC_001526.2
 2914 2915 hg19 chr4 111905692 111905693 q25 LINC02945, ENSG00000288691 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020305 Human Papillomavirus HPV16 NC_001526.2
 7499 7500 hg19 chr16 62693393 62693394 q21 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated