Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020306 Human Papillomavirus HPV16 NC_001526.2
 5679 5680 hg19 chr16 62693402 62693403 q21 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020307 Human Papillomavirus HPV16 NC_001526.2
 3779 3780 hg19 chr5 135011437 135011438 q31.1 CATSPER3 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020308 Human Papillomavirus HPV16 NC_001526.2
 4367 4368 hg19 chr5 135570674 135570675 q31.1 ENSG00000250167, SLC25A48 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020309 Human Papillomavirus HPV16 NC_001526.2
 3392 3393 hg19 chr17 75827738 75827739 q25.1 UNC13D Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020310 Human Papillomavirus HPV16 NC_001526.2
 3657 3658 hg19 chr17 75830694 75830695 q25.1 UNC13D Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020311 Human Papillomavirus HPV16 NC_001526.2
 3277 3278 hg19 chr17 75834822 75834823 q25.1 UNC13D Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020312 Human Papillomavirus HPV16 NC_001526.2
 4732 4733 hg19 chr17 75837200 75837201 q25.1 UNC13D Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020313 Human Papillomavirus HPV16 NC_001526.2
 5622 5623 hg19 chr17 75986320 75986321 q25.1 TEN1-CDK3, TEN1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020314 Human Papillomavirus HPV16 NC_001526.2
 2753 2754 hg19 chr3 194143279 194143280 q29 ENSG00000304085 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020315 Human Papillomavirus HPV16 NC_001526.2
 3256 3257 hg19 chr18 63499630 63499631 q21.33 SERPINB5 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated