Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020366 Human Papillomavirus HPV16 NC_001526.2
 6360 6361 hg19 chr22 19754720 19754721 q11.21 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020367 Human Papillomavirus HPV16 NC_001526.2
 1642 1643 hg19 chr22 19758700 19758701 q11.21 TBX1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020368 Human Papillomavirus HPV16 NC_001526.2
 6998 6999 hg19 chr22 19803515 19803516 q11.21 GNB1L Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020369 Human Papillomavirus HPV16 NC_001526.2
 6338 6339 hg19 chr22 19829885 19829886 q11.21 GNB1L Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020370 Human Papillomavirus HPV16 NC_001526.2
 2360 2361 hg19 chr11 66535246 66535247 q13.2 ZDHHC24 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020371 Human Papillomavirus HPV16 NC_001526.2
 2479 2480 hg19 chr11 66535268 66535269 q13.2 ZDHHC24 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020372 Human Papillomavirus HPV16 NC_001526.2
 2031 2032 hg19 chr17 82741584 82741585 q25.3 FN3K Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020373 Human Papillomavirus HPV16 NC_001526.2
 2089 2090 hg19 chr17 82841557 82841558 q25.3 TBCD Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020374 Human Papillomavirus HPV16 NC_001526.2
 5172 5173 hg19 chr2 49521467 49521468 p16.3 ENSG00000282998 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020375 Human Papillomavirus HPV16 NC_001526.2
 6290 6291 hg19 chr2 49541403 49541404 p16.3 ENSG00000282998 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated