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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020376 Human Papillomavirus HPV16 NC_001526.2
 2665 2666 hg19 chr2 49562764 49562765 p16.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020377 Human Papillomavirus HPV16 NC_001526.2
 2766 2767 hg19 chr2 49562777 49562778 p16.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020378 Human Papillomavirus HPV16 NC_001526.2
 7473 7474 hg19 chr2 49562777 49562778 p16.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020379 Human Papillomavirus HPV16 NC_001526.2
 6289 6290 hg19 chr2 49564791 49564792 p16.3 ENSG00000282828 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020380 Human Papillomavirus HPV16 NC_001526.2
 3582 3602 hg19 chr7 152405840 152405843 q36.1 KMT2C Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020381 Human Papillomavirus HPV16 NC_001526.2
 5621 5622 hg19 chr9 5542796 5542797 p24.1 PDCD1LG2, ENSG00000286162 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020382 Human Papillomavirus HPV16 NC_001526.2
 1033 1034 hg19 chr9 5544852 5544853 p24.1 PDCD1LG2, ENSG00000286162 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020383 Human Papillomavirus HPV16 NC_001526.2
 6513 6514 hg19 chr8 127675268 127675269 q24.21 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020384 Human Papillomavirus HPV16 NC_001526.2
 1143 1144 hg19 chr8 127730581 127730582 q24.21 CASC11 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020385 Human Papillomavirus HPV16 NC_001526.2
 1128 1129 hg19 chr8 127730596 127730597 q24.21 CASC11 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated