Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020386 Human Papillomavirus HPV16 NC_001526.2
 6911 6912 hg19 chr8 127735523 127735524 q24.21 MYC, CASC11 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020387 Human Papillomavirus HPV16 NC_001526.2
 879 882 hg19 chr3 5388068 5388071 p26.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020388 Human Papillomavirus HPV16 NC_001526.2
 6859 6879 hg19 chr3 5388090 5388093 p26.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020389 Human Papillomavirus HPV16 NC_001526.2
 2675 2676 hg19 chr19 43193660 43193661 q13.31 PSG4 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020390 Human Papillomavirus HPV16 NC_001526.2
 1970 1971 hg19 chr4 107683071 107683072 q25 PAPSS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020391 Human Papillomavirus HPV16 NC_001526.2
 2048 2049 hg19 chr4 107683848 107683849 q25 PAPSS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020392 Human Papillomavirus HPV16 NC_001526.2
 2051 2054 hg19 chr4 107683878 107683879 q25 PAPSS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020393 Human Papillomavirus HPV16 NC_001526.2
 3034 3035 hg19 chr4 107743031 107743032 q25 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020394 Human Papillomavirus HPV16 NC_001526.2
 4939 4940 hg19 chr11 111427216 111427217 q23.1 POU2AF1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020395 Human Papillomavirus HPV16 NC_001526.2
 2604 2605 hg19 chr11 111427220 111427221 q23.1 POU2AF1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated