Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020396 Human Papillomavirus HPV16 NC_001526.2
6591 6592 hg19 1 153268523 153268524 q21.3 ENSG00000301414 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020397 Human Papillomavirus HPV16 NC_001526.2
2528 2533 hg19 1 153464323 153464343 q21.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020398 Human Papillomavirus HPV16 NC_001526.2
3441 3442 hg19 15 92727053 92727054 q26.1 ENSG00000296445, ENSG00000293323, FAM174B Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020399 Human Papillomavirus HPV16 NC_001526.2
3191 3192 hg19 15 92727629 92727630 q26.1 ENSG00000293323, FAM174B Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020400 Human Papillomavirus HPV16 NC_001526.2
3434 3436 hg19 15 92818898 92818902 q26.1 ENSG00000306260 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020401 Human Papillomavirus HPV16 NC_001526.2
4287 4288 hg19 14 103138389 103138390 q32.32 ENSG00000293155 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020402 Human Papillomavirus HPV16 NC_001526.2
5482 5483 hg19 15 101312658 101312659 q26.3 PCSK6 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020403 Human Papillomavirus HPV16 NC_001526.2
2314 2317 hg19 15 101367523 101367543 q26.3 PCSK6 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020404 Human Papillomavirus HPV16 NC_001526.2
3649 3650 hg19 1 196492479 196492480 q31.3 KCNT2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020405 Human Papillomavirus HPV16 NC_001526.2
5597 5598 hg19 1 196500131 196500132 q31.3 KCNT2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated