TVIS20020396
|
Human Papillomavirus |
HPV16 |
NC_001526.2 |
6591 |
6592 |
hg19 |
1 |
153268523 |
153268524 |
q21.3 |
ENSG00000301414 |
Tumor-derived tumor samples and cell lines |
Oropharyngeal squamous cell carcinoma |
Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS |
34903527 |
2022 |
Curated |
TVIS20020397
|
Human Papillomavirus |
HPV16 |
NC_001526.2 |
2528 |
2533 |
hg19 |
1 |
153464323 |
153464343 |
q21.3 |
- |
Tumor-derived tumor samples and cell lines |
Oropharyngeal squamous cell carcinoma |
Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS |
34903527 |
2022 |
Curated |
TVIS20020398
|
Human Papillomavirus |
HPV16 |
NC_001526.2 |
3441 |
3442 |
hg19 |
15 |
92727053 |
92727054 |
q26.1 |
ENSG00000296445, ENSG00000293323, FAM174B |
Tumor-derived tumor samples and cell lines |
Oropharyngeal squamous cell carcinoma |
Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS |
34903527 |
2022 |
Curated |
TVIS20020399
|
Human Papillomavirus |
HPV16 |
NC_001526.2 |
3191 |
3192 |
hg19 |
15 |
92727629 |
92727630 |
q26.1 |
ENSG00000293323, FAM174B |
Tumor-derived tumor samples and cell lines |
Oropharyngeal squamous cell carcinoma |
Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS |
34903527 |
2022 |
Curated |
TVIS20020400
|
Human Papillomavirus |
HPV16 |
NC_001526.2 |
3434 |
3436 |
hg19 |
15 |
92818898 |
92818902 |
q26.1 |
ENSG00000306260 |
Tumor-derived tumor samples and cell lines |
Oropharyngeal squamous cell carcinoma |
Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS |
34903527 |
2022 |
Curated |
TVIS20020401
|
Human Papillomavirus |
HPV16 |
NC_001526.2 |
4287 |
4288 |
hg19 |
14 |
103138389 |
103138390 |
q32.32 |
ENSG00000293155 |
Tumor-derived tumor samples and cell lines |
Oropharyngeal squamous cell carcinoma |
Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS |
34903527 |
2022 |
Curated |
TVIS20020402
|
Human Papillomavirus |
HPV16 |
NC_001526.2 |
5482 |
5483 |
hg19 |
15 |
101312658 |
101312659 |
q26.3 |
PCSK6 |
Tumor-derived tumor samples and cell lines |
Oropharyngeal squamous cell carcinoma |
Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS |
34903527 |
2022 |
Curated |
TVIS20020403
|
Human Papillomavirus |
HPV16 |
NC_001526.2 |
2314 |
2317 |
hg19 |
15 |
101367523 |
101367543 |
q26.3 |
PCSK6 |
Tumor-derived tumor samples and cell lines |
Oropharyngeal squamous cell carcinoma |
Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS |
34903527 |
2022 |
Curated |
TVIS20020404
|
Human Papillomavirus |
HPV16 |
NC_001526.2 |
3649 |
3650 |
hg19 |
1 |
196492479 |
196492480 |
q31.3 |
KCNT2 |
Tumor-derived tumor samples and cell lines |
Oropharyngeal squamous cell carcinoma |
Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS |
34903527 |
2022 |
Curated |
TVIS20020405
|
Human Papillomavirus |
HPV16 |
NC_001526.2 |
5597 |
5598 |
hg19 |
1 |
196500131 |
196500132 |
q31.3 |
KCNT2 |
Tumor-derived tumor samples and cell lines |
Oropharyngeal squamous cell carcinoma |
Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS |
34903527 |
2022 |
Curated |