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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020436 Human Papillomavirus HPV16 NC_001526.2
 5056 5059 hg19 chr15 82063402 82063422 q25.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020437 Human Papillomavirus HPV16 NC_001526.2
 1078 1079 hg19 chr15 82065383 82065384 q25.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020438 Human Papillomavirus HPV16 NC_001526.2
 4458 4472 hg19 chr15 82178949 82178952 q25.2 ENSG00000289703, EFL1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020439 Human Papillomavirus HPV16 NC_001526.2
 2371 2374 hg19 chr15 82195823 82195843 q25.2 EFL1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020440 Human Papillomavirus HPV16 NC_001526.2
 5962 5963 hg19 chr16 46391510 46391511 q11.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020441 Human Papillomavirus HPV16 NC_001526.2
 1862 1863 hg19 chr17 40280182 40280183 q21.2 WIPF2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020442 Human Papillomavirus HPV16 NC_001526.2
 5867 5868 hg19 chr2 28041242 28041243 p23.2 BABAM2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020443 Human Papillomavirus HPV16 NC_001526.2
 2610 2611 hg19 chr2 28067670 28067671 p23.2 BABAM2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020444 Human Papillomavirus HPV16 NC_001526.2
 6017 6018 hg19 chr2 28067678 28067679 p23.2 BABAM2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020445 Human Papillomavirus HPV16 NC_001526.2
 7675 7676 hg19 chr2 28071250 28071251 p23.2 BABAM2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated