Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020456 Human Papillomavirus HPV16 NC_001526.2
 5455 5456 hg19 4 67122135 67122136 q13.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020457 Human Papillomavirus HPV16 NC_001526.2
 6723 6724 hg19 4 67129036 67129037 q13.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020458 Human Papillomavirus HPV16 NC_001526.2
 7454 7455 hg19 4 67155751 67155752 q13.2 ENSG00000298266 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020459 Human Papillomavirus HPV16 NC_001526.2
 2284 2285 hg19 4 67156311 67156312 q13.2 ENSG00000298266 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020460 Human Papillomavirus HPV16 NC_001526.2
 5752 5753 hg19 4 67205539 67205540 q13.2 ENSG00000298266 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020461 Human Papillomavirus HPV16 NC_001526.2
 6166 6185 hg19 4 67296473 67296493 q13.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020462 Human Papillomavirus HPV16 NC_001526.2
 207 208 hg19 5 154215355 154215356 q33.2 GALNT10, MFAP3 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020463 Human Papillomavirus HPV16 NC_001526.2
 1748 1751 hg19 5 154247790 154247810 q33.2 GALNT10 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020464 Human Papillomavirus HPV16 NC_001526.2
 6832 6833 hg19 5 154331026 154331027 q33.2 GALNT10, SAP30L-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020465 Human Papillomavirus HPV16 NC_001526.2
 6862 6863 hg19 5 154331032 154331033 q33.2 GALNT10, SAP30L-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated