Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020466 Human Papillomavirus HPV16 NC_001526.2
 6688 6689 hg19 chr5 154459663 154459664 q33.2 SAP30L Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020467 Human Papillomavirus HPV16 NC_001526.2
 795 815 hg19 chr5 154476157 154476177 q33.2 HAND1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020468 Human Papillomavirus HPV16 NC_001526.2
 5977 5978 hg19 chr5 154490030 154490031 q33.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020469 Human Papillomavirus HPV16 NC_001526.2
 568 588 hg19 chr8 17407515 17407535 p22 MTMR7 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020470 Human Papillomavirus HPV16 NC_001526.2
 5563 5564 hg19 chr8 17699604 17699605 p22 MTUS1, ENSG00000301996 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020471 Human Papillomavirus HPV16 NC_001526.2
 926 927 hg19 chr9 8933370 8933371 p24.1 PTPRD Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020472 Human Papillomavirus HPV16 NC_001526.2
 2543 2544 hg19 chr9 5437959 5437960 p24.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020473 Human Papillomavirus HPV16 NC_001526.2
 1652 1653 hg19 chr9 5437977 5437978 p24.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020474 Human Papillomavirus HPV16 NC_001526.2
 2480 2483 hg19 chr1 226744709 226744711 q42.12 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020475 Human Papillomavirus HPV16 NC_001526.2
 2397 2398 hg19 chr1 226767297 226767298 q42.12 ENSG00000307739 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated