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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020476 Human Papillomavirus HPV16 NC_001526.2
 2362 2363 hg19 chr1 226767301 226767302 q42.12 ENSG00000307739 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020477 Human Papillomavirus HPV16 NC_001526.2
 3724 3725 hg19 chr10 18627454 18627455 p12.31 NSUN6 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020478 Human Papillomavirus HPV16 NC_001526.2
 7693 7694 hg19 chr3 2098514 2098515 p26.3 ENSG00000288831 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020479 Human Papillomavirus HPV16 NC_001526.2
 2211 2212 hg19 chr3 2098516 2098517 p26.3 ENSG00000288831 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020480 Human Papillomavirus HPV16 NC_001526.2
 4483 4486 hg19 chr3 2101395 2101397 p26.3 CNTN4 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020481 Human Papillomavirus HPV16 NC_001526.2
 7050 7053 hg19 chr3 2106411 2106414 p26.3 CNTN4 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020482 Human Papillomavirus HPV16 NC_001526.2
 2457 2458 hg19 chr3 2106422 2106423 p26.3 CNTN4 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020483 Human Papillomavirus HPV16 NC_001526.2
 1027 1047 hg19 chr8 128771605 128771625 q24.21 ENSG00000310114, CCDC26 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated