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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020634 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr1 209290503 209463848 q32.2 LINC01696, ENSG00000308105, MIR205HG, MIR205, LINC01698, ENSG00000304736, ENSG00000305041 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020635 Human Papillomavirus HPV16 NC_028125
 - - hg19 chrX 88698694 89443695 q21.31 ENSG00000271157, ENSG00000232576, ENSG00000270745, SRIP2, CPXCR1, ENSG00000225012 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020636 Human Papillomavirus HPV16 NC_028125
 - - hg19 chrY 14830244 16942124 q11.221 MED13P1, CYCSP46, ENSG00000252689, RNU6-109P, RNU6-184P, ENSG00000304558, PUDPP1, STSP1, ENSG00000295335, ENSG00000309341, ENSG00000286201, ENSG00000224518, ENSG00000295583, ENSG00000300212, NLGN4Y Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020637 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr11 70689040 70842935 q13.4 Y_RNA, ENSG00000280089, SHANK2 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020638 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr11 70695667 70849562 q13.4 Y_RNA, ENSG00000280089, SHANK2 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020639 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr11 70695669 70849564 q13.4 Y_RNA, ENSG00000280089, SHANK2 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020640 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr11 70697430 70851325 q13.4 Y_RNA, ENSG00000280089, SHANK2 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020641 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr11 70707450 70861345 q13.4 SHANK2 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020642 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr15 23594230 23839377 q11.2 MAGEL2, NDN, RNU6-741P, MKRN3, ENSG00000308904, ENSG00000286973, ENSG00000309817 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020643 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr19 3727021 3727023 p13.3 TJP3 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated