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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20030604 Human Papillomavirus HPV16 NC_001526.2
 -7017 - hg38 chr1 -146609081 -146609081 q21.1 ENSG00000291242, HYDIN2 Tumor Squamous cell carcinoma DNA extraction and HPV hybridization capture sequencing 37244055 2023 Curated
TVIS20030605 Human Papillomavirus HPV16 NC_001526.2
 1120 - hg38 chr1 146608701 146608701 q21.1 ENSG00000291242, HYDIN2 Tumor Squamous cell carcinoma DNA extraction and HPV hybridization capture sequencing 37244055 2023 Curated
TVIS20030606 Human Papillomavirus HPV16 NC_001526.2
 1251 - hg38 chr16 -71101896 -71101896 q22.2 ENSG00000259833, HYDIN Tumor Squamous cell carcinoma DNA extraction and HPV hybridization capture sequencing 37244055 2023 Curated
TVIS20030607 Human Papillomavirus HPV16 NC_001526.2
 -7349 - hg38 chr19 27092011 27092011 q11 - Tumor Squamous cell carcinoma DNA extraction and HPV hybridization capture sequencing 37244055 2023 Curated
TVIS20030608 Human Papillomavirus HPV16 NC_001526.2
 2468 - hg38 chr1 235390610 235390610 q42.3 ENSG00000285053, TBCE Tumor Squamous cell carcinoma DNA extraction and HPV hybridization capture sequencing 37244055 2023 Curated
TVIS20030609 Human Papillomavirus HPV16 NC_001526.2
 -4205 - hg38 chr2 226142798 226142798 q36.3 ENSG00000235070 Tumor Squamous cell carcinoma DNA extraction and HPV hybridization capture sequencing 37244055 2023 Curated
TVIS20030610 Human Papillomavirus HPV16 NC_001526.2
 2468 - hg38 chr4 -86814173 -86814173 q21.3 PTPN13 Tumor Squamous cell carcinoma DNA extraction and HPV hybridization capture sequencing 37244055 2023 Curated
TVIS20030611 Human Papillomavirus HPV16 NC_001526.2
 -889 - hg38 chr4 -86812634 -86812634 q21.3 PTPN13 Tumor Squamous cell carcinoma DNA extraction and HPV hybridization capture sequencing 37244055 2023 Curated
TVIS20030612 Human Papillomavirus HPV16 NC_001526.2
 -1012 - hg38 chr4 86813822 86813822 q21.3 PTPN13 Tumor Squamous cell carcinoma DNA extraction and HPV hybridization capture sequencing 37244055 2023 Curated
TVIS20030613 Human Papillomavirus HPV16 NC_001526.2
 -1252 - hg38 chr3 -189262042 -189262042 q28 TPRG1 Tumor No DNA extraction and HPV hybridization capture sequencing 37244055 2023 Curated
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