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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS43000116 Merkel cell polyomavirus - JN707599.1
 706 592 hg38 chr11 25063416 25063435 p14.3 LUZP2 Cell line Merkel cell carcinoma Viral capture sequencing 32833988 2020 ViMIC
TVIS43000117 Merkel cell polyomavirus - JN707599.1
 1818 1939 hg38 chr13 71480943 71546428 q21.33 DACH1 Cell line Merkel cell carcinoma Viral capture sequencing 32833988 2020 ViMIC
TVIS43000118 Merkel cell polyomavirus - JN707599.1
 1663 1654 hg38 chr9 136133905 136432018 q34.3 ENSG00000305829, ENSG00000303985, ENSG00000279813, ENSG00000306667, DKFZP434A062, DNLZ, ENTR1, LHX3, QSOX2, ENSG00000299478, CCDC187, ENSG00000283769, GPSM1, ENSG00000289701, ENSG00000300558, CARD9, SNAPC4, PMPCA, INPP5E Cell line Merkel cell carcinoma Viral capture sequencing 32833988 2020 ViMIC
TVIS43000119 Merkel cell polyomavirus - JN707599.1
 738 1519 hg38 chr5 51618447 51618453 q11.2 ENSG00000288035 Cell line Merkel cell carcinoma Viral capture sequencing 32833988 2020 ViMIC
TVIS43000120 Merkel cell polyomavirus - JN707599.1
 397 4225 hg38 chr20 31665275 31785438 q11.21 ABALON, ENSG00000289492, BCL2L1-AS1, TPX2, BCL2L1 Cell line Merkel cell carcinoma Viral capture sequencing 32833988 2020 ViMIC
TVIS43000121 Merkel cell polyomavirus - JN707599.1
 2261 3755 hg38 chr20 31715051 31749139 q11.21 ABALON, ENSG00000289492, BCL2L1-AS1, TPX2, BCL2L1 Cell line Merkel cell carcinoma Viral capture sequencing 32833988 2020 ViMIC
TVIS43000122 Merkel cell polyomavirus - JN707599.1
 1136 3916 hg38 chr4 189948666 189965715 q35.2 FRG1 Cell line Merkel cell carcinoma Viral capture sequencing 32833988 2020 ViMIC
TVIS43000123 Merkel cell polyomavirus - JN707599.1
 1855 2470 hg38 chr5 150238240 150404900 q32,q33.1 CAMK2A, ARSI, TCOF1, CD74 Cell line Merkel cell carcinoma Viral capture sequencing 32833988 2020 ViMIC
TVIS43000124 Merkel cell polyomavirus - JN707599.1
 5290 5193 hg38 chr3 64619639 64619644 p14.1 ADAMTS9 Primary tumor Merkel cell carcinoma Viral capture sequencing 32833988 2020 ViMIC
TVIS43000125 Merkel cell polyomavirus - NC_010277.2
 - - hg19 chr3 182247982 182247993 q26.33 ENSG00000299972, LINC01994 Tumor Merkel cell carcinoma Deep sequencing with OncoPanel 32188490 2020 ViMIC
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