Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20004413 Human Papillomavirus HPV16 NC_001526.1
 2875 - GRCh37.p5 17 41522697 41522697 q21.2 - Tumor Oropharyngeal squamous cell carcinoma Detection of integrated papilloma sequences & PCR (DIPS-PCR) 24586376 2014 VISDB1.0
TVIS20004414 Human Papillomavirus HPV16 NC_001526.1
 1124 - GRCh37.p5 7 100152441 100152441 q21.1 LAMTOR4 Tumor Oropharyngeal squamous cell carcinoma Detection of integrated papilloma sequences & PCR (DIPS-PCR) 24586376 2014 VISDB1.0
TVIS20004415 Human Papillomavirus HPV16 NC_001526.1
 2894 - GRCh37.p5 8 127254511 127254511 q24.21 ENSG00000287781, PCAT1 Tumor Oropharyngeal squamous cell carcinoma Detection of integrated papilloma sequences & PCR (DIPS-PCR) 24586376 2014 VISDB1.0
TVIS20004416 Human Papillomavirus HPV16 NC_001526.1
 2908 - GRCh37.p5 7 104518626 104518626 q22.2 LHFPL3 Tumor Oropharyngeal squamous cell carcinoma Detection of integrated papilloma sequences & PCR (DIPS-PCR) 24586376 2014 VISDB1.0
TVIS20004417 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 8 63857113 63857113 p12.3 LINC01414 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004418 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 8 63900301 63900301 p12.3 LINC01414 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004419 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 2 28267829 28267829 p23.2 ENSG00000305917, BABAM2 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004420 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 17 41668629 41668629 q21 - Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004421 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 18 35499051 35499051 q12.2 - Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004422 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 6 89081158 89081158 q15 PNRC1 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0