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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20005099 Human Papillomavirus HPV18 Not given - - hg19 chr8 143419896 143428273 q24.3 MAFA Tumor Adenocarcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005100 Human Papillomavirus HPV18 Not given - - hg19 chr8 143419680 143419996 q24.3 MAFA Tumor Adenocarcinoma Whole-genome sequencing 24390348 2014 VISDB1.0
TVIS20005101 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 chr9 95048802 95196638 q22.32 MIR6081, ENSG00000296343, MIR23B, MIR27B, MIR3074, MIR24-1, ENSG00000229065, ENSG00000223849, RNA5SP288, ENSG00000296603, AOPEP, FANCC Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005102 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 chr17 39693982 39738755 q12 ENSG00000305964, MIR4728, MIEN1, GRB7, PGAP3, ERBB2 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005103 Human Papillomavirus HPV31 Not given - - hg19 chr2 145569722 145585164 q22.3 ENSG00000225107, ENSG00000286225 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005104 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 chr1 213965966 214025459 q32.3 ENSG00000302836, ENSG00000274895, PROX1, LINC02775, ENSG00000225233, PROX1-AS1 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005105 Human Papillomavirus HPV52 HQ537731.1
 - - hg19 chr14 68519324 68562539 q24.1 ENSG00000306173, RAD51B Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005106 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 chr1 244066950 244080304 q44 ENSG00000297283, ENSG00000279774, ENSG00000229960 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005107 Human Papillomavirus HPV56 Not given - - hg19 chr3 189880071 189889453 q28 TP63 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005108 Human Papillomavirus HPV33 Not given - - hg19 chr22 17633057 17633623 q11.21 BCL2L13 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
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