Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20004564 Human Papillomavirus HPV16 NC_001526.2
 2030 2057 hg19 2 22479181 22479210 p24.1 LINC03116, LINC01830 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004565 Human Papillomavirus HPV16 NC_001526.2
 2246 2280 hg19 6 45691417 45691442 p21.1 - Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004566 Human Papillomavirus HPV16 NC_001526.2
 2965 2986 hg19 X 145708231 145708255 q27.3 ENSG00000286085 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004567 Human Papillomavirus HPV16 NC_001526.2
 3091 3111 hg19 X 145688743 145688759 q27.3 ENSG00000286085 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004568 Human Papillomavirus HPV16 NC_001526.2
 3156 3182 hg19 X 145716492 145716514 q27.3 ENSG00000286085 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004569 Human Papillomavirus HPV16 NC_001526.2
 3199 3226 hg19 7 6925188 6925214 p22.1 ENSG00000295732, ALG1L5P, ENSG00000295758 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004570 Human Papillomavirus HPV16 NC_001526.2
 3230 3263 hg19 19 55305122 55305159 q13.42 BRSK1 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004571 Human Papillomavirus HPV16 NC_001526.2
 3486 3513 hg19 19 55310194 55310219 q13.42 BRSK1 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004572 Human Papillomavirus HPV16 NC_001526.2
 3704 3728 hg19 6 45691360 45691384 p21.1 - Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004573 Human Papillomavirus HPV16 NC_001526.2
 4541 4578 hg19 7 7639527 7639559 p21.3 RPA3 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0