Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20004574 Human Papillomavirus HPV16 NC_001526.2
 4564 4593 hg19 7 7641295 7641326 p21.3 RPA3, UMAD1, ENSG00000283549 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004575 Human Papillomavirus HPV16 NC_001526.2
 4598 4613 hg19 X 145716531 145716575 q27.3 ENSG00000286085 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004576 Human Papillomavirus HPV16 NC_001526.2
 4940 4962 hg19 2 27095245 27095272 p23.3 KHK Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004577 Human Papillomavirus HPV16 NC_001526.2
 5380 5404 hg19 2 22422746 22422774 p24.1 LINC03116, LINC01830 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004578 Human Papillomavirus HPV16 NC_001526.2
 5437 5464 hg19 7 7589190 7589273 p21.3 MIOS, ENSG00000293795 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004579 Human Papillomavirus HPV16 NC_001526.2
 5441 5464 hg19 7 7589190 7589215 p21.3 MIOS, ENSG00000293795 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004581 Human Papillomavirus HPV16 NC_001526.2
 5597 5621 hg19 7 63523951 63523977 q11.21 - Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004582 Human Papillomavirus HPV16 NC_001526.2
 5957 5987 hg19 2 22439141 22439163 p24.1 LINC03116, LINC01830 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004583 Human Papillomavirus HPV16 NC_001526.2
 6801 6827 hg19 2 22416193 22416220 p24.1 LINC03116, LINC01830 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004584 Human Papillomavirus HPV16 NC_001526.2
 6876 6902 hg19 19 55307401 55307456 q13.42 BRSK1 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0