Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20004640 Human Papillomavirus HPV16 NC_001526.2
 1685 1703 hg19 20 47032273 47032299 q13.12 EYA2 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004642 Human Papillomavirus HPV16 NC_001526.2
 505 531 hg19 11 71451898 71451922 q13.4 DHCR7-DT, DHCR7 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004643 Human Papillomavirus HPV16 NC_001526.2
 552 580 hg19 8 37488663 37488686 p11.23 LINC01605 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004644 Human Papillomavirus HPV18 NC_001357.1
 189 206 hg19 5 57538854 57538885 q11.2 - Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004645 Human Papillomavirus HPV18 NC_001357.1
 351 382 hg19 5 59481635 59481664 q11.2 PDE4D Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004646 Human Papillomavirus HPV18 NC_001357.1
 379 404 hg19 5 59499391 59499420 q11.2 PDE4D Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004647 Human Papillomavirus HPV18 NC_001357.1
 379 420 hg19 5 59499387 59499420 q11.2 PDE4D Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004648 Human Papillomavirus HPV18 NC_001357.1
 2475 2501 hg19 5 57461357 57461383 q11.2 RMEL3 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004650 Human Papillomavirus HPV18 NC_001357.1
 3464 3496 hg19 5 59477878 59477905 q11.2 PDE4D Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004651 Human Papillomavirus HPV18 NC_001357.1
 4225 4255 hg19 5 57534396 57534419 q11.2 RMEL3 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0