| Basic Information ▶ | |
| VISDB ID | TVIS10023458 |
|---|---|
| Fusion Name | HBV-chr2:169477958 integration |
| Validated | No |
| Curated Way | ViMIC |
| Method | Bioinformatics analysis |
| Wet Assay | No |
| Sample ID | - |
| Sample Name | 087502T |
| Sample Type | Tumor |
| Age | 49 |
| Gender | Male |
| Disease Information ▶ | |
| Disease Name | Hepatocellular carcinoma |
| Disease Abbreviation | HCC |
| Cancer | Yes |
| Literature ▶ | |
| PubMed ID | 32797164 |
| Journal | Bioscience reports |
| Published Year | 2020 |
| Human Genome ▶ | |
| Human Genome Version Description | GRCh37/hg19 |
| Human Genome RefSeq Accession | GCF_000001405.13 |
| Human Chromosome | chr2 |
| Cytogenetic Band | q31.1 |
| Human Strand | |
| Human Integration Location Type | intergenic |
| Hg19 Start | 170334468 |
| Hg19 End | 170334469 |
| Hg38 Start | 169477958 |
| Hg38 End | 169477959 |
| Junction Sequence | - |
| Target Gene ▶ | |
| Target Gene | - |
| Nearby Gene | BBS5,ENSG00000251569 |
| Distance | 1522 |
| Virus Information ▶ | |
| Virus Name | Hepatitis B virus |
| Virus Subtype Name | - |
| Virus Genome Accession | AB014381.1 |
| TaxonomyID | 10407 |
| Virus Abbreviation | HBV |
| Virus Genome | Hepatitis B virus 22Y04HCC genomic DNA, complete sequence |
| Virus Genome Length | 3215 bp |
| Virus Breakpoint1 | - |
| Virus Breakpoint2 | - |
| Virus Gene Name | - |
| Virus Region Type | - |
| Integrated Virus Sequence | - |
| ViMIC ID | 1402765 |
Center for Precision Health
McWilliams School of Biomedical Informatics at UTHealth Houston
7000 Fannin Street, Suite 600, Houston, TX 77030
Email: Zhongming Zhao, Ph.D