Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10045161

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10045161
Fusion NameHBV-MYO7B integration
ValidatedNo
Curated WayCurated
MethodHBV capture sequencing
Wet AssayYes
Sample ID1754
Sample Name#1754T
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID33563643
JournalGut
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr2
Cytogenetic Bandq14.3
Human Strand
Human Integration Location Typeexonic
Hg19 Start128327483
Hg19 End128327483
Hg38 Start127569908
Hg38 End127569908
Junction SequenceTCCCATTCGTAGTGAGACCC
Target Gene
Target GeneMYO7B
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameHBV_A
Virus Genome AccessionX02763
TaxonomyID10407
Virus AbbreviationHBV
Virus GenomeHepatitis b virus genome (serotype adw2)
Virus Genome Length3221 bp
Virus Breakpoint12188
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-