Details for VISDB ID: TVIS20021767

Basic Information

• VISDB ID: TVIS20021767
• Fusion Name: HPV-ENSG00000294974 integration
• Validated: No
• Curated Way: Curated
• Method: HPV capture sequencing
• Wet Assay: Yes
• Sample ID: 18O002325.1
• Sample Name: New sample
• Sample Type: Tumor
• Age: -
• Gender: -

Disease Information

• Disease Name: Cervical cancer
• Disease Abbreviation: CC
• Cancer: Yes

Literature

• PubMed ID: 35968887
• Journal: Clinical and Translational Medicine
• Published Year: 2022

Human Genome

• Human Genome Version Description: GRCh38/hg38
• Human Genome RefSeq Accession: GCF_000001405.40
• Human Chromosome: chr3
• Cytogenetic Band: q27.3
• Human Strand: .
• Human Integration Location Type: intronic
• Hg19 Start: -
• Hg19 End: -
• Hg38 Start: 186524007
• Hg38 End: 186524007
• Junction Sequence: -

Target Gene

• Target Gene: ENSG00000294974
• Nearby Gene: -
• Distance: -

Virus Information

• Virus Name: Human Papillomavirus
• Virus Subtype Name: HPV55
• Virus Genome Accession: U31788
• TaxonomyID: 10566
• Virus Abbreviation: HPV
• Virus Genome: Human papillomavirus type 44, complete genome
• Virus Genome Length: 7,833 bp
• Virus Breakpoint1: 1067
• Virus Breakpoint2: -
• Virus Gene Name: E1
• Virus Region Type: -
• Integrated Virus Sequence: -
• ViMIC ID: -