Details for VISDB ID: TVIS30002725

Basic Information

• VISDB ID: TVIS30002725
• Fusion Name: HIV-chr17 integration
• Validated: No
• Curated Way: VISDB1.0
• Method: QiaQuick PCR and Sequencing
• Wet Assay: No
• Sample ID: Active CD4+
• Sample Name: Active CD4+
• Sample Type: Cell line
• Age: -
• Gender: -

Disease Information

• Disease Name: HIV-infected disease
• Disease Abbreviation: HID
• Cancer: No

Literature

• PubMed ID: 23953889
• Journal: Retrovirology
• Published Year: 2013

Human Genome

• Human Genome Version Description: GRCh37/hg19
• Human Genome RefSeq Accession: GCF_000001405.13
• Human Chromosome: chr17
• Cytogenetic Band: q21.31
• Human Strand: -
• Human Integration Location Type: Intergenic
• Hg19 Start: 41548062
• Hg19 End: 41548062
• Hg38 Start: 43470694
• Hg38 End: 43470694
• Junction Sequence: -

Target Gene

• Target Gene: -
• Nearby Gene: RNU6-971P
• Distance: 2891

Virus Information

• Virus Name: Human Immunodeficiency Virus
• Virus Subtype Name: -
• Virus Genome Accession: Not given
• TaxonomyID: 11676
• Virus Abbreviation: HIV
• Virus Genome: -
• Virus Genome Length: 9719
• Virus Breakpoint1: -
• Virus Breakpoint2: -
• Virus Gene Name: -
• Virus Region Type: -
• Integrated Virus Sequence: -
• ViMIC ID: -