Details for VISDB ID: TVIS42001537

Basic Information

• VISDB ID: TVIS42001537
• Fusion Name: EBV-chr8:133356883 integration
• Validated: No
• Curated Way: Curated
• Method: EBV capture sequencing, followed by Viral Integration Pathway Analysis (VIPA) pipeline
• Wet Assay: No
• Sample ID: SAMEA1709516.54
• Sample Name: ERP001026
• Sample Type: Tumor
• Age: -
• Gender: -

Disease Information

• Disease Name: Multiple
• Disease Abbreviation: -
• Cancer: Yes

Literature

• PubMed ID: 35968887
• Journal: Clinical and Translational Medicine
• Published Year: 2022

Human Genome

• Human Genome Version Description: GRCh38/hg38
• Human Genome RefSeq Accession: GCF_000001405.40
• Human Chromosome: chr8
• Cytogenetic Band: q24.22
• Human Strand: +
• Human Integration Location Type: intergenic
• Hg19 Start: -
• Hg19 End: -
• Hg38 Start: 133356883
• Hg38 End: 133356883
• Junction Sequence: ttgcAAGACTCACTTATTCCTACTTTCAGAAATCTTAAATGTCTGCTTTTACTCTTGGACCAGGCTGTCATTCTATCAGaa

Target Gene

• Target Gene: -
• Nearby Gene: ENSG00000308533
• Distance: 6288

Virus Information

• Virus Name: Epstein-Barr Virus
• Virus Subtype Name: -
• Virus Genome Accession: NC_007605
• TaxonomyID: 10376
• Virus Abbreviation: EBV
• Virus Genome: Human gammaherpesvirus 4, complete genome
• Virus Genome Length: 171823 bp
• Virus Breakpoint1: 140536
• Virus Breakpoint2: -
• Virus Gene Name: RPMS1
• Virus Region Type: -
• Integrated Virus Sequence: -
• ViMIC ID: -