| Basic Information ▶ | |
| VISDB ID | TVIS43000133 |
|---|---|
| Fusion Name | MCV-ENSG00000259914 integration |
| Validated | No |
| Curated Way | ViMIC |
| Method | Deep sequencing with OncoPanel |
| Wet Assay | Yes |
| Sample ID | - |
| Sample Name | MCC022 |
| Sample Type | Tumor |
| Age | - |
| Gender | - |
| Disease Information ▶ | |
| Disease Name | Merkel cell carcinoma |
| Disease Abbreviation | MCC |
| Cancer | Yes |
| Literature ▶ | |
| PubMed ID | 32188490 |
| Journal | Genome medicine |
| Published Year | 2020 |
| Human Genome ▶ | |
| Human Genome Version Description | GRCh37/hg19 |
| Human Genome RefSeq Accession | GCF_000001405.13 |
| Human Chromosome | chr16 |
| Cytogenetic Band | q23.3 |
| Human Strand | |
| Human Integration Location Type | exonic |
| Hg19 Start | 83581326 |
| Hg19 End | 83890305 |
| Hg38 Start | 83547721 |
| Hg38 End | 83856700 |
| Junction Sequence | - |
| Target Gene ▶ | |
| Target Gene | ENSG00000259914, ENSG00000261103, CDH13-AS2, CEDORA, HSBP1, CDH13, ENSG00000288849 |
| Nearby Gene | - |
| Distance | - |
| Virus Information ▶ | |
| Virus Name | Merkel cell polyomavirus |
| Virus Subtype Name | - |
| Virus Genome Accession | NC_010277.2 |
| TaxonomyID | 493803 |
| Virus Abbreviation | MCV |
| Virus Genome | Merkel cell polyomavirus isolate R17b, complete genome |
| Virus Genome Length | 5387 bp |
| Virus Breakpoint1 | - |
| Virus Breakpoint2 | - |
| Virus Gene Name | - |
| Virus Region Type | - |
| Integrated Virus Sequence | - |
| ViMIC ID | 7300023 |
Center for Precision Health
McWilliams School of Biomedical Informatics at UTHealth Houston
7000 Fannin Street, Suite 600, Houston, TX 77030
Email: Zhongming Zhao, Ph.D