Details for VISDB ID: TVIS44026811

Basic Information

• VISDB ID: TVIS44026811
• Fusion Name: HTLV-1-TSPAN31 integration
• Validated: No
• Curated Way: VISDB1.0
• Method: High throughput sequenicng
• Wet Assay: No
• Sample ID: HTLV-1 carrier#1
• Sample Name: HTLV-1 carrier#1
• Sample Type: Nontumor
• Age: -
• Gender: -

Disease Information

• Disease Name: Not given
• Disease Abbreviation: -
• Cancer: -

Literature

• PubMed ID: 29186194
• Journal: PLOS Pathogens
• Published Year: 2017

Human Genome

• Human Genome Version Description: GRCh37/hg19
• Human Genome RefSeq Accession: GCF_000001405.13
• Human Chromosome: chr12
• Cytogenetic Band: q14.1
• Human Strand: +
• Human Integration Location Type: Intronic
• Hg19 Start: 58140340
• Hg19 End: 58140340
• Hg38 Start: 57746557
• Hg38 End: 57746557
• Junction Sequence: -

Target Gene

• Target Gene: TSPAN31
• Nearby Gene: -
• Distance: -

Virus Information

• Virus Name: Human T-lymphotropic Virus
• Virus Subtype Name: -
• Virus Genome Accession: Not given
• TaxonomyID: 11908
• Virus Abbreviation: HTLV-1
• Virus Genome: -
• Virus Genome Length: 9046
• Virus Breakpoint1: -
• Virus Breakpoint2: -
• Virus Gene Name: -
• Virus Region Type: -
• Integrated Virus Sequence: -
• ViMIC ID: -