Details for VISDB ID: TVIS44031492

Basic Information

• VISDB ID: TVIS44031492
• Fusion Name: HTLV-1-chr20 integration
• Validated: No
• Curated Way: VISDB1.0
• Method: High throughput sequenicng
• Wet Assay: No
• Sample ID: -
• Sample Name: Mono16
• Sample Type: Nontumor
• Age: 48
• Gender: -

Disease Information

• Disease Name: Not given
• Disease Abbreviation: -
• Cancer: -

Literature

• PubMed ID: 30307560
• Journal: The Journal of Infectious Diseases
• Published Year: 2019

Human Genome

• Human Genome Version Description: hg18
• Human Genome RefSeq Accession: GCF_000001405.12
• Human Chromosome: chr20
• Cytogenetic Band: p12.2
• Human Strand: +
• Human Integration Location Type: -
• Hg19 Start: 10321611
• Hg19 End: 10321611
• Hg38 Start: 10392963
• Hg38 End: 10392963
• Junction Sequence: -

Target Gene

• Target Gene: -
• Nearby Gene: SDAD1P2
• Distance: 5157

Virus Information

• Virus Name: Human T-lymphotropic Virus
• Virus Subtype Name: HTLV-1c
• Virus Genome Accession: KF242506
• TaxonomyID: 11908
• Virus Abbreviation: HTLV-1
• Virus Genome: Human T-lymphotropic virus 1 strain Aus isolate Aus-CS, complete genome
• Virus Genome Length: 9046
• Virus Breakpoint1: -
• Virus Breakpoint2: -
• Virus Gene Name: -
• Virus Region Type: -
• Integrated Virus Sequence: -
• ViMIC ID: -