Details for VISDB ID: TVIS44035038

Basic Information

• VISDB ID: TVIS44035038
• Fusion Name: HTLV-1-chr14:20627716 integration
• Validated: No
• Curated Way: Curated
• Method: Linker-mediated PCR (LM-PCR) and high-throughput sequencing
• Wet Assay: Yes
• Sample ID: -
• Sample Name: HBT
• Sample Type: Tumor
• Age: -
• Gender: -

Disease Information

• Disease Name: -
• Disease Abbreviation: -
• Cancer: -

Literature

• PubMed ID: 33844021
• Journal: The Journal of Infectious Diseases
• Published Year: 2022

Human Genome

• Human Genome Version Description: GRCh37/hg19
• Human Genome RefSeq Accession: GCF_000001405.13
• Human Chromosome: chr14
• Cytogenetic Band: q11.2
• Human Strand: +
• Human Integration Location Type: intergenic
• Hg19 Start: 21095875
• Hg19 End: 21095875
• Hg38 Start: 20627716
• Hg38 End: 20627716
• Junction Sequence: -

Target Gene

• Target Gene: -
• Nearby Gene: ENSG00000296288
• Distance: 4579

Virus Information

• Virus Name: Human T-lymphotropic Virus
• Virus Subtype Name: -
• Virus Genome Accession: -
• TaxonomyID: 11908
• Virus Abbreviation: HTLV-1
• Virus Genome: -
• Virus Genome Length: -
• Virus Breakpoint1: -
• Virus Breakpoint2: -
• Virus Gene Name: -
• Virus Region Type: -
• Integrated Virus Sequence: -
• ViMIC ID: -