Details for VISDB ID: TVIS45000057

Basic Information

• VISDB ID: TVIS45000057
• Fusion Name: MCV-FOXO6 integration
• Validated: No
• Curated Way: ViMIC
• Method: RNA sequencing
• Wet Assay: Yes
• Sample ID: -
• Sample Name: NCI-N417
• Sample Type: Cell line
• Age: -
• Gender: -

Disease Information

• Disease Name: Small cell lung cancer
• Disease Abbreviation: SCLC
• Cancer: Yes

Literature

• PubMed ID: 25485619
• Journal: Nature Biotechnology
• Published Year: 2015

Human Genome

• Human Genome Version Description: GRCh37/hg19
• Human Genome RefSeq Accession: GCF_000001405.13
• Human Chromosome: chr1
• Cytogenetic Band: p34.2
• Human Strand: +
• Human Integration Location Type: exonic
• Hg19 Start: 41827812
• Hg19 End: 41833779
• Hg38 Start: 41362140
• Hg38 End: 41368107
• Junction Sequence: -

Target Gene

• Target Gene: FOXO6
• Nearby Gene: -
• Distance: -

Virus Information

• Virus Name: Merkel cell polyomavirus
• Virus Subtype Name: -
• Virus Genome Accession: -
• TaxonomyID: 493803
• Virus Abbreviation: MCV
• Virus Genome: -
• Virus Genome Length: -
• Virus Breakpoint1: 5469
• Virus Breakpoint2: 5553
• Virus Gene Name: -
• Virus Region Type: -
• Integrated Virus Sequence: -
• ViMIC ID: 8100028