Details for VISDB ID: TVIS45000062

Basic Information

• VISDB ID: TVIS45000062
• Fusion Name: MCV-ENSG00000286067 integration
• Validated: No
• Curated Way: ViMIC
• Method: RNA sequencing
• Wet Assay: Yes
• Sample ID: -
• Sample Name: BHY
• Sample Type: Cell line
• Age: -
• Gender: -

Disease Information

• Disease Name: Oral squamous cell carcinoma
• Disease Abbreviation: OSCC
• Cancer: Yes

Literature

• PubMed ID: 25485619
• Journal: Nature Biotechnology
• Published Year: 2015

Human Genome

• Human Genome Version Description: GRCh37/hg19
• Human Genome RefSeq Accession: GCF_000001405.13
• Human Chromosome: chr12
• Cytogenetic Band: q24.23
• Human Strand: +
• Human Integration Location Type: exonic
• Hg19 Start: 120648681
• Hg19 End: 120661568
• Hg38 Start: 120210878
• Hg38 End: 120223765
• Junction Sequence: -

Target Gene

• Target Gene: ENSG00000286067, PXN-AS1, PXN
• Nearby Gene: -
• Distance: -

Virus Information

• Virus Name: Merkel cell polyomavirus
• Virus Subtype Name: -
• Virus Genome Accession: -
• TaxonomyID: 493803
• Virus Abbreviation: MCV
• Virus Genome: -
• Virus Genome Length: -
• Virus Breakpoint1: 835
• Virus Breakpoint2: 995
• Virus Gene Name: -
• Virus Region Type: -
• Integrated Virus Sequence: -
• ViMIC ID: 8100033