Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20003798 Human Papillomavirus HPV18 AY262282.1
 957 997 hg19 chr3 182397876 182397876 q26.33 LINC01994 Tumor Not given PCR and Sanger sequencing 25581428 2015 VISDB1.0
TVIS20004275 Human Papillomavirus HPV16 AY686584
 1855 - hg19 chr3 180628355 180628355 q26.33 CCDC39, ENSG00000145075 Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20004276 Human Papillomavirus HPV16 AY686584
 6157 - hg19 chr3 180611148 180611148 q26.33 TTC14, CCDC39 Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20004277 Human Papillomavirus HPV16 AY686584
 6160 - hg19 chr3 180535106 180535106 q26.33 TTC14-DT Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20004278 Human Papillomavirus HPV16 AY686584
 1716 - hg19 chr3 180592811 180592811 q26.33 TTC14-DT Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20005043 Human Papillomavirus HPV33 Not given 2061 - hg19 chr3 111780248 111780248 q13.2 PLCXD2, PHLDB2 Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20005044 Human Papillomavirus HPV33 Not given 2495 - hg19 chr3 111774722 111774722 q13.2 PLCXD2, PHLDB2 Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20004376 Human Papillomavirus HPV16 NC_001526.1
 4989 - Unknown chr3 - - q26.31 - Tumor Cervical cancer Detection of integrated papilloma sequences & PCR (DIPS-PCR) 25218242 2014 VISDB1.0
TVIS20004381 Human Papillomavirus HPV16 NC_001526.1
 1194 - Unknown chr3 - - q28 - Tumor Cervical cancer Detection of integrated papilloma sequences & PCR (DIPS-PCR) 25218242 2014 VISDB1.0
TVIS20004383 Human Papillomavirus HPV16 NC_001526.1
 3167 - Unknown chr3 - - q21.31 - Tumor Cervical cancer Detection of integrated papilloma sequences & PCR (DIPS-PCR) 25218242 2014 VISDB1.0