Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS10062390 Hepatitis B virus Genotype D EU054331, X02763, GQ477489, AB219428, D00331, GQ924620, GQ358158, AB246345, and U95551
 3180 - hg38 chr7 7705852 7705852 p21.3 RPA3, ENSG00000308992, UMAD1, ENSG00000283549 Cell line Hepatocellular carcinoma Rapid Amplification of Integration Site without Interference by Genomic DNA contamination (RAISING) method and next-generation sequencing 38051537 2023 Curated
TVIS10062391 Hepatitis B virus Genotype D EU054331, X02763, GQ477489, AB219428, D00331, GQ924620, GQ358158, AB246345, and U95551
 503 - hg38 chr1 630538 630538 p36.33 MTND2P28, ENSG00000293331, LINC00115 Cell line Hepatocellular carcinoma Rapid Amplification of Integration Site without Interference by Genomic DNA contamination (RAISING) method and next-generation sequencing 38051537 2023 Curated
TVIS10062392 Hepatitis B virus Genotype D EU054331, X02763, GQ477489, AB219428, D00331, GQ924620, GQ358158, AB246345, and U95551
 1242 - hg38 chr6 12017287 12017287 p24.1 ENSG00000310274, HIVEP1 Cell line Hepatocellular carcinoma Rapid Amplification of Integration Site without Interference by Genomic DNA contamination (RAISING) method and next-generation sequencing 38051537 2023 Curated
TVIS10062393 Hepatitis B virus Genotype D EU054331, X02763, GQ477489, AB219428, D00331, GQ924620, GQ358158, AB246345, and U95551
 496 - hg38 chr15 50125750 50125750 q21.2 ATP8B4 Cell line Hepatocellular carcinoma Rapid Amplification of Integration Site without Interference by Genomic DNA contamination (RAISING) method and next-generation sequencing 38051537 2023 Curated
TVIS10062394 Hepatitis B virus Genotype D EU054331, X02763, GQ477489, AB219428, D00331, GQ924620, GQ358158, AB246345, and U95551
 1760 - hg38 chr2 16922581 16922581 p24.2 - Cell line Hepatocellular carcinoma Rapid Amplification of Integration Site without Interference by Genomic DNA contamination (RAISING) method and next-generation sequencing 38051537 2023 Curated
TVIS10062395 Hepatitis B virus Genotype D EU054331, X02763, GQ477489, AB219428, D00331, GQ924620, GQ358158, AB246345, and U95551
 341 - hg38 chr1 629360 629360 p36.33 MTND1P23, ENSG00000293331, LINC00115 Cell line Hepatocellular carcinoma Rapid Amplification of Integration Site without Interference by Genomic DNA contamination (RAISING) method and next-generation sequencing 38051537 2023 Curated
TVIS10062396 Hepatitis B virus Genotype D EU054331, X02763, GQ477489, AB219428, D00331, GQ924620, GQ358158, AB246345, and U95551
 505 - hg38 chr7 158071793 158071793 q36.3 PTPRN2 Cell line Hepatocellular carcinoma Rapid Amplification of Integration Site without Interference by Genomic DNA contamination (RAISING) method and next-generation sequencing 38051537 2023 Curated
TVIS10062397 Hepatitis B virus Genotype D EU054331, X02763, GQ477489, AB219428, D00331, GQ924620, GQ358158, AB246345, and U95551
 1718 - hg38 chr4 177918044 177918044 q34.3 LINC01098 Cell line Hepatocellular carcinoma Rapid Amplification of Integration Site without Interference by Genomic DNA contamination (RAISING) method and next-generation sequencing 38051537 2023 Curated
TVIS10062398 Hepatitis B virus Genotype D EU054331, X02763, GQ477489, AB219428, D00331, GQ924620, GQ358158, AB246345, and U95551
 3180 - hg38 chr5 134925420 134925420 q31.1 MTND5P11, PCBD2 Cell line Hepatocellular carcinoma Rapid Amplification of Integration Site without Interference by Genomic DNA contamination (RAISING) method and next-generation sequencing 38051537 2023 Curated
TVIS10062399 Hepatitis B virus Genotype D EU054331, X02763, GQ477489, AB219428, D00331, GQ924620, GQ358158, AB246345, and U95551
 3180 - hg38 chrX 50742917 50742917 p11.22 SHROOM4 Cell line Hepatocellular carcinoma Rapid Amplification of Integration Site without Interference by Genomic DNA contamination (RAISING) method and next-generation sequencing 38051537 2023 Curated