Cancer Cell Metabolism Gene Database

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 10564
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000371917; ENSP00000360985; ENSG00000124198.
Genome annotation databasesGeneID 10564; -.
Genome annotation databasesKEGG hsa:10564; -.
Genome annotation databasesUCSC uc002xtx.4; human.
Sequence databasesCCDS CCDS13411.1; -.
Sequence databasesEMBL AF084521; AAD38428.1; -; mRNA.
Sequence databasesEMBL AL049537; CAI19320.1; -; Genomic_DNA.
Sequence databasesEMBL AL121903; CAI19320.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL121903; CAI19614.1; -; Genomic_DNA.
Sequence databasesEMBL AL049537; CAI19614.1; JOINED; Genomic_DNA.
Sequence databasesRefSeq NP_006411.2; NM_006420.2.
Sequence databasesUniGene Hs.62578; -.
Polymorphism databasesDMDM 146329988; -.
Gene expression databasesBgee Q9Y6D5; -.
Gene expression databasesCleanEx HS_ARFGEF2; -.
Gene expression databasesExpressionAtlas Q9Y6D5; baseline and differential.
Gene expression databasesGenevestigator Q9Y6D5; -.
OntologiesGO GO:0032279; C:asymmetric synapse; ISS:UniProtKB.
OntologiesGO GO:0005879; C:axonemal microtubule; ISS:UniProtKB.
OntologiesGO GO:0030054; C:cell junction; IEA:UniProtKB-KW.
OntologiesGO GO:0031410; C:cytoplasmic vesicle; ISS:UniProtKB.
OntologiesGO GO:0005829; C:cytosol; IDA:MGI.
OntologiesGO GO:0043197; C:dendritic spine; ISS:UniProtKB.
OntologiesGO GO:0000139; C:Golgi membrane; IDA:UniProtKB.
OntologiesGO GO:0016020; C:membrane; IDA:UniProtKB.
OntologiesGO GO:0005815; C:microtubule organizing center; IDA:UniProtKB.
OntologiesGO GO:0055037; C:recycling endosome; IDA:UniProtKB.
OntologiesGO GO:0032280; C:symmetric synapse; ISS:UniProtKB.
OntologiesGO GO:0005802; C:trans-Golgi network; ISS:UniProtKB.
OntologiesGO GO:0005086; F:ARF guanyl-nucleotide exchange factor activity; IDA:UniProtKB.
OntologiesGO GO:0050811; F:GABA receptor binding; ISS:UniProtKB.
OntologiesGO GO:0005085; F:guanyl-nucleotide exchange factor activity; IDA:MGI.
OntologiesGO GO:0034237; F:protein kinase A regulatory subunit binding; IDA:UniProtKB.
OntologiesGO GO:0010256; P:endomembrane system organization; IMP:UniProtKB.
OntologiesGO GO:0007032; P:endosome organization; IMP:UniProtKB.
OntologiesGO GO:0006887; P:exocytosis; TAS:ProtInc.
OntologiesGO GO:0006893; P:Golgi to plasma membrane transport; IMP:UniProtKB.
OntologiesGO GO:0035556; P:intracellular signal transduction; IDA:MGI.
OntologiesGO GO:0043547; P:positive regulation of GTPase activity; IDA:GOC.
OntologiesGO GO:0032760; P:positive regulation of tumor necrosis factor production; IMP:UniProtKB.
OntologiesGO GO:0015031; P:protein transport; IEA:UniProtKB-KW.
OntologiesGO GO:0001881; P:receptor recycling; IDA:UniProtKB.
OntologiesGO GO:0032012; P:regulation of ARF protein signal transduction; IEA:InterPro.
OntologiesGO GO:0016192; P:vesicle-mediated transport; IBA:RefGenome.
Proteomic databasesMaxQB Q9Y6D5; -.
Proteomic databasesPaxDb Q9Y6D5; -.
Proteomic databasesPRIDE Q9Y6D5; -.
Family and domain databasesGene3D 1.10.1000.11; -; 1.
Family and domain databasesInterPro IPR016024; ARM-type_fold.
Family and domain databasesInterPro IPR015403; DUF1981_Sec7_assoc.
Family and domain databasesInterPro IPR023394; Sec7_alpha_orthog.
Family and domain databasesInterPro IPR000904; Sec7_dom.
Family and domain databasesPfam PF09324; DUF1981; 1.
Family and domain databasesPfam PF01369; Sec7; 1.
Family and domain databasesPROSITE PS50190; SEC7; 1.
Family and domain databasesSMART SM00222; Sec7; 1.
Family and domain databasesSUPFAM SSF48371; SSF48371; 3.
Family and domain databasesSUPFAM SSF48425; SSF48425; 1.
PTM databasesPhosphoSite Q9Y6D5; -.
Protein-protein interaction databasesBioGrid 115815; 28.
Protein-protein interaction databasesDIP DIP-48794N; -.
Protein-protein interaction databasesIntAct Q9Y6D5; 12.
Protein-protein interaction databasesMINT MINT-1200143; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000360985; -.
Enzyme and pathway databasesReactome REACT_16907; Association of TriC/CCT with target proteins during biosynthesis.
3D structure databasesPDB 3L8N; X-ray; 2.86 A; A=635-836.
3D structure databasesPDB 3SWV; X-ray; 3.00 A; A=635-836.
3D structure databasesPDBsum 3L8N; -.
3D structure databasesPDBsum 3SWV; -.
3D structure databasesProteinModelPortal Q9Y6D5; -.
3D structure databasesSMR Q9Y6D5; 637-828.
Phylogenomic databaseseggNOG COG5307; -.
Phylogenomic databasesGeneTree ENSGT00760000119036; -.
Phylogenomic databasesHOGENOM HOG000181045; -.
Phylogenomic databasesHOVERGEN HBG004846; -.
Phylogenomic databasesInParanoid Q9Y6D5; -.
Phylogenomic databasesKO K18442; -.
Phylogenomic databasesOMA DALAYFI; -.
Phylogenomic databasesOrthoDB EOG7QVM1S; -.
Phylogenomic databasesPhylomeDB Q9Y6D5; -.
Phylogenomic databasesTreeFam TF300714; -.
Organism-specific databasesCTD 10564; -.
Organism-specific databasesGeneCards GC20P047538; -.
Organism-specific databasesH-InvDB HIX0015895; -.
Organism-specific databasesHGNC HGNC:15853; ARFGEF2.
Organism-specific databasesHPA CAB026382; -.
Organism-specific databasesHPA HPA026078; -.
Organism-specific databasesMIM 605371; gene.
Organism-specific databasesMIM 608097; phenotype.
Organism-specific databasesneXtProt NX_Q9Y6D5; -.
Organism-specific databasesOrphanet 98892; Periventricular nodular heterotopia.
Organism-specific databasesPharmGKB PA24945; -.
OtherChiTaRS ARFGEF2; human.
OtherGeneWiki ARFGEF2; -.
OtherGenomeRNAi 10564; -.
OtherNextBio 40093; -.
OtherPRO PR:Q9Y6D5; -.



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