Cancer Cell Metabolism Gene Database

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 10087
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000261415; ENSP00000261415; ENSG00000113163. [Q9Y5P4-2]
Genome annotation databasesEnsembl ENST00000380494; ENSP00000369862; ENSG00000113163. [Q9Y5P4-3]
Genome annotation databasesEnsembl ENST00000405807; ENSP00000383996; ENSG00000113163. [Q9Y5P4-1]
Genome annotation databasesGeneID 10087; -.
Genome annotation databasesKEGG hsa:10087; -.
Genome annotation databasesUCSC uc003kds.3; human. [Q9Y5P4-2]
Genome annotation databasesUCSC uc003kdt.3; human. [Q9Y5P4-3]
Genome annotation databasesUCSC uc003kdu.2; human. [Q9Y5P4-1]
Sequence databasesCCDS CCDS4028.1; -. [Q9Y5P4-1]
Sequence databasesCCDS CCDS4029.1; -. [Q9Y5P4-2]
Sequence databasesCCDS CCDS47235.1; -. [Q9Y5P4-3]
Sequence databasesEMBL AF136450; AAD30288.1; -; mRNA.
Sequence databasesEMBL AF232930; AAG42046.1; -; mRNA.
Sequence databasesEMBL AF232935; AAG42051.1; -; Genomic_DNA.
Sequence databasesEMBL AY453385; AAR26717.1; -; mRNA.
Sequence databasesEMBL AY453386; AAR26718.1; -; mRNA.
Sequence databasesEMBL AK091851; BAC03762.1; -; mRNA.
Sequence databasesEMBL AK096854; BAG53379.1; -; mRNA.
Sequence databasesEMBL AK292087; BAF84776.1; -; mRNA.
Sequence databasesEMBL AC008897; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL AC112183; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL AC116341; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL CH471084; EAW95757.1; -; Genomic_DNA.
Sequence databasesEMBL CH471084; EAW95760.1; -; Genomic_DNA.
Sequence databasesEMBL BC000102; AAH00102.1; -; mRNA.
Sequence databasesEMBL AB036934; BAB58974.1; -; Genomic_DNA.
Sequence databasesEMBL AB036936; BAB58977.1; -; Genomic_DNA.
Sequence databasesRefSeq NP_001123577.1; NM_001130105.1. [Q9Y5P4-3]
Sequence databasesRefSeq NP_005704.1; NM_005713.2. [Q9Y5P4-1]
Sequence databasesRefSeq NP_112729.1; NM_031361.2. [Q9Y5P4-2]
Sequence databasesRefSeq XP_006714576.1; XM_006714513.1. [Q9Y5P4-1]
Sequence databasesUniGene Hs.270437; -.
Polymorphism databasesDMDM 20978413; -.
Gene expression databasesBgee Q9Y5P4; -.
Gene expression databasesCleanEx HS_COL4A3BP; -.
Gene expression databasesGenevestigator Q9Y5P4; -.
OntologiesGO GO:0005829; C:cytosol; TAS:Reactome.
OntologiesGO GO:0005789; C:endoplasmic reticulum membrane; TAS:Reactome.
OntologiesGO GO:0005794; C:Golgi apparatus; IDA:UniProtKB.
OntologiesGO GO:0005739; C:mitochondrion; IEA:Ensembl.
OntologiesGO GO:0005634; C:nucleus; IDA:HPA.
OntologiesGO GO:0097001; F:ceramide binding; IDA:UniProtKB.
OntologiesGO GO:0035620; F:ceramide transporter activity; IDA:UniProtKB.
OntologiesGO GO:0070273; F:phosphatidylinositol-4-phosphate binding; IDA:UniProtKB.
OntologiesGO GO:0004672; F:protein kinase activity; TAS:ProtInc.
OntologiesGO GO:0000902; P:cell morphogenesis; IEA:Ensembl.
OntologiesGO GO:0008283; P:cell proliferation; IEA:Ensembl.
OntologiesGO GO:0006672; P:ceramide metabolic process; IEA:Ensembl.
OntologiesGO GO:0007029; P:endoplasmic reticulum organization; IEA:Ensembl.
OntologiesGO GO:0035621; P:ER to Golgi ceramide transport; IMP:UniProtKB.
OntologiesGO GO:0003007; P:heart morphogenesis; IEA:Ensembl.
OntologiesGO GO:0006955; P:immune response; NAS:UniProtKB.
OntologiesGO GO:0001701; P:in utero embryonic development; IEA:Ensembl.
OntologiesGO GO:0055088; P:lipid homeostasis; IEA:Ensembl.
OntologiesGO GO:0070584; P:mitochondrion morphogenesis; IEA:Ensembl.
OntologiesGO GO:0006936; P:muscle contraction; IEA:Ensembl.
OntologiesGO GO:0006468; P:protein phosphorylation; TAS:ProtInc.
OntologiesGO GO:0034976; P:response to endoplasmic reticulum stress; IEA:Ensembl.
OntologiesGO GO:0007165; P:signal transduction; IEA:Ensembl.
OntologiesGO GO:0044281; P:small molecule metabolic process; TAS:Reactome.
OntologiesGO GO:0030148; P:sphingolipid biosynthetic process; TAS:Reactome.
OntologiesGO GO:0006665; P:sphingolipid metabolic process; TAS:Reactome.
Proteomic databasesMaxQB Q9Y5P4; -.
Proteomic databasesPaxDb Q9Y5P4; -.
Proteomic databasesPRIDE Q9Y5P4; -.
Family and domain databasesGene3D 2.30.29.30; -; 1.
Family and domain databasesGene3D 3.30.530.20; -; 1.
Family and domain databasesInterPro IPR001849; PH_domain.
Family and domain databasesInterPro IPR011993; PH_like_dom.
Family and domain databasesInterPro IPR023393; START-like_dom.
Family and domain databasesInterPro IPR002913; START_lipid-bd_dom.
Family and domain databasesPfam PF00169; PH; 1.
Family and domain databasesPfam PF01852; START; 1.
Family and domain databasesPROSITE PS50003; PH_DOMAIN; 1.
Family and domain databasesPROSITE PS50848; START; 1.
Family and domain databasesSMART SM00233; PH; 1.
Family and domain databasesSMART SM00234; START; 1.
PTM databasesPhosphoSite Q9Y5P4; -.
Protein-protein interaction databasesBioGrid 115396; 16.
Protein-protein interaction databasesIntAct Q9Y5P4; 13.
Protein-protein interaction databasesMINT MINT-1441568; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000369862; -.
Enzyme and pathway databasesBRENDA 2.7.11.9; 2681.
Enzyme and pathway databasesReactome REACT_115810; Sphingolipid de novo biosynthesis.
3D structure databasesPDB 2E3M; X-ray; 2.20 A; A=347-624.
3D structure databasesPDB 2E3N; X-ray; 1.40 A; A=347-624.
3D structure databasesPDB 2E3O; X-ray; 1.55 A; A=347-624.
3D structure databasesPDB 2E3P; X-ray; 1.40 A; A/B=347-624.
3D structure databasesPDB 2E3Q; X-ray; 2.08 A; A=347-624.
3D structure databasesPDB 2E3R; X-ray; 1.65 A; A/B=347-624.
3D structure databasesPDB 2E3S; X-ray; 1.94 A; A=347-624.
3D structure databasesPDB 2RSG; NMR; -; A=24-117.
3D structure databasesPDB 2Z9Y; X-ray; 1.80 A; A=347-624.
3D structure databasesPDB 2Z9Z; X-ray; 1.74 A; A=347-624.
3D structure databasesPDB 3H3Q; X-ray; 2.00 A; A/B=347-624.
3D structure databasesPDB 3H3R; X-ray; 1.85 A; A/B=347-624.
3D structure databasesPDB 3H3S; X-ray; 1.66 A; A/B=347-624.
3D structure databasesPDB 3H3T; X-ray; 2.40 A; A/B=347-624.
3D structure databasesPDB 4HHV; X-ray; 1.75 A; A/B=20-121.
3D structure databasesPDBsum 2E3M; -.
3D structure databasesPDBsum 2E3N; -.
3D structure databasesPDBsum 2E3O; -.
3D structure databasesPDBsum 2E3P; -.
3D structure databasesPDBsum 2E3Q; -.
3D structure databasesPDBsum 2E3R; -.
3D structure databasesPDBsum 2E3S; -.
3D structure databasesPDBsum 2RSG; -.
3D structure databasesPDBsum 2Z9Y; -.
3D structure databasesPDBsum 2Z9Z; -.
3D structure databasesPDBsum 3H3Q; -.
3D structure databasesPDBsum 3H3R; -.
3D structure databasesPDBsum 3H3S; -.
3D structure databasesPDBsum 3H3T; -.
3D structure databasesPDBsum 4HHV; -.
3D structure databasesProteinModelPortal Q9Y5P4; -.
3D structure databasesSMR Q9Y5P4; 20-121, 391-624.
Phylogenomic databaseseggNOG NOG238964; -.
Phylogenomic databasesGeneTree ENSGT00650000093230; -.
Phylogenomic databasesHOVERGEN HBG050753; -.
Phylogenomic databasesInParanoid Q9Y5P4; -.
Phylogenomic databasesKO K08283; -.
Phylogenomic databasesOMA WPTSMPS; -.
Phylogenomic databasesOrthoDB EOG7G7KNJ; -.
Phylogenomic databasesPhylomeDB Q9Y5P4; -.
Phylogenomic databasesTreeFam TF106160; -.
Organism-specific databasesCTD 10087; -.
Organism-specific databasesGeneCards GC05M074664; -.
Organism-specific databasesHGNC HGNC:2205; COL4A3BP.
Organism-specific databasesHPA HPA035645; -.
Organism-specific databasesMIM 604677; gene.
Organism-specific databasesneXtProt NX_Q9Y5P4; -.
Organism-specific databasesPharmGKB PA26720; -.
OtherEvolutionaryTrace Q9Y5P4; -.
OtherGeneWiki COL4A3BP; -.
OtherGenomeRNAi 10087; -.
OtherNextBio 38145; -.
OtherPRO PR:Q9Y5P4; -.
Genome annotation databasesEnsembl ENST00000261415; ENSP00000261415; ENSG00000113163. [Q9Y5P4-2]
Genome annotation databasesEnsembl ENST00000380494; ENSP00000369862; ENSG00000113163. [Q9Y5P4-3]
Genome annotation databasesEnsembl ENST00000405807; ENSP00000383996; ENSG00000113163. [Q9Y5P4-1]
Genome annotation databasesGeneID 10087; -.
Genome annotation databasesKEGG hsa:10087; -.
Genome annotation databasesUCSC uc003kds.3; human. [Q9Y5P4-2]
Genome annotation databasesUCSC uc003kdt.3; human. [Q9Y5P4-3]
Genome annotation databasesUCSC uc003kdu.2; human. [Q9Y5P4-1]
Sequence databasesCCDS CCDS4028.1; -. [Q9Y5P4-1]
Sequence databasesCCDS CCDS4029.1; -. [Q9Y5P4-2]
Sequence databasesCCDS CCDS47235.1; -. [Q9Y5P4-3]
Sequence databasesEMBL AF136450; AAD30288.1; -; mRNA.
Sequence databasesEMBL AF232930; AAG42046.1; -; mRNA.
Sequence databasesEMBL AF232935; AAG42051.1; -; Genomic_DNA.
Sequence databasesEMBL AY453385; AAR26717.1; -; mRNA.
Sequence databasesEMBL AY453386; AAR26718.1; -; mRNA.
Sequence databasesEMBL AK091851; BAC03762.1; -; mRNA.
Sequence databasesEMBL AK096854; BAG53379.1; -; mRNA.
Sequence databasesEMBL AK292087; BAF84776.1; -; mRNA.
Sequence databasesEMBL AC008897; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL AC112183; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL AC116341; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL CH471084; EAW95757.1; -; Genomic_DNA.
Sequence databasesEMBL CH471084; EAW95760.1; -; Genomic_DNA.
Sequence databasesEMBL BC000102; AAH00102.1; -; mRNA.
Sequence databasesEMBL AB036934; BAB58974.1; -; Genomic_DNA.
Sequence databasesEMBL AB036936; BAB58977.1; -; Genomic_DNA.
Sequence databasesRefSeq NP_001123577.1; NM_001130105.1. [Q9Y5P4-3]
Sequence databasesRefSeq NP_005704.1; NM_005713.2. [Q9Y5P4-1]
Sequence databasesRefSeq NP_112729.1; NM_031361.2. [Q9Y5P4-2]
Sequence databasesRefSeq XP_006714576.1; XM_006714513.1. [Q9Y5P4-1]
Sequence databasesUniGene Hs.270437; -.
Polymorphism databasesDMDM 20978413; -.
Gene expression databasesBgee Q9Y5P4; -.
Gene expression databasesCleanEx HS_COL4A3BP; -.
Gene expression databasesGenevestigator Q9Y5P4; -.
OntologiesGO GO:0005829; C:cytosol; TAS:Reactome.
OntologiesGO GO:0005789; C:endoplasmic reticulum membrane; TAS:Reactome.
OntologiesGO GO:0005794; C:Golgi apparatus; IDA:UniProtKB.
OntologiesGO GO:0005739; C:mitochondrion; IEA:Ensembl.
OntologiesGO GO:0005634; C:nucleus; IDA:HPA.
OntologiesGO GO:0097001; F:ceramide binding; IDA:UniProtKB.
OntologiesGO GO:0035620; F:ceramide transporter activity; IDA:UniProtKB.
OntologiesGO GO:0070273; F:phosphatidylinositol-4-phosphate binding; IDA:UniProtKB.
OntologiesGO GO:0004672; F:protein kinase activity; TAS:ProtInc.
OntologiesGO GO:0000902; P:cell morphogenesis; IEA:Ensembl.
OntologiesGO GO:0008283; P:cell proliferation; IEA:Ensembl.
OntologiesGO GO:0006672; P:ceramide metabolic process; IEA:Ensembl.
OntologiesGO GO:0007029; P:endoplasmic reticulum organization; IEA:Ensembl.
OntologiesGO GO:0035621; P:ER to Golgi ceramide transport; IMP:UniProtKB.
OntologiesGO GO:0003007; P:heart morphogenesis; IEA:Ensembl.
OntologiesGO GO:0006955; P:immune response; NAS:UniProtKB.
OntologiesGO GO:0001701; P:in utero embryonic development; IEA:Ensembl.
OntologiesGO GO:0055088; P:lipid homeostasis; IEA:Ensembl.
OntologiesGO GO:0070584; P:mitochondrion morphogenesis; IEA:Ensembl.
OntologiesGO GO:0006936; P:muscle contraction; IEA:Ensembl.
OntologiesGO GO:0006468; P:protein phosphorylation; TAS:ProtInc.
OntologiesGO GO:0034976; P:response to endoplasmic reticulum stress; IEA:Ensembl.
OntologiesGO GO:0007165; P:signal transduction; IEA:Ensembl.
OntologiesGO GO:0044281; P:small molecule metabolic process; TAS:Reactome.
OntologiesGO GO:0030148; P:sphingolipid biosynthetic process; TAS:Reactome.
OntologiesGO GO:0006665; P:sphingolipid metabolic process; TAS:Reactome.
Proteomic databasesMaxQB Q9Y5P4; -.
Proteomic databasesPaxDb Q9Y5P4; -.
Proteomic databasesPRIDE Q9Y5P4; -.
Family and domain databasesGene3D 2.30.29.30; -; 1.
Family and domain databasesGene3D 3.30.530.20; -; 1.
Family and domain databasesInterPro IPR001849; PH_domain.
Family and domain databasesInterPro IPR011993; PH_like_dom.
Family and domain databasesInterPro IPR023393; START-like_dom.
Family and domain databasesInterPro IPR002913; START_lipid-bd_dom.
Family and domain databasesPfam PF00169; PH; 1.
Family and domain databasesPfam PF01852; START; 1.
Family and domain databasesPROSITE PS50003; PH_DOMAIN; 1.
Family and domain databasesPROSITE PS50848; START; 1.
Family and domain databasesSMART SM00233; PH; 1.
Family and domain databasesSMART SM00234; START; 1.
PTM databasesPhosphoSite Q9Y5P4; -.
Protein-protein interaction databasesBioGrid 115396; 16.
Protein-protein interaction databasesIntAct Q9Y5P4; 13.
Protein-protein interaction databasesMINT MINT-1441568; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000369862; -.
Enzyme and pathway databasesBRENDA 2.7.11.9; 2681.
Enzyme and pathway databasesReactome REACT_115810; Sphingolipid de novo biosynthesis.
3D structure databasesPDB 2E3M; X-ray; 2.20 A; A=347-624.
3D structure databasesPDB 2E3N; X-ray; 1.40 A; A=347-624.
3D structure databasesPDB 2E3O; X-ray; 1.55 A; A=347-624.
3D structure databasesPDB 2E3P; X-ray; 1.40 A; A/B=347-624.
3D structure databasesPDB 2E3Q; X-ray; 2.08 A; A=347-624.
3D structure databasesPDB 2E3R; X-ray; 1.65 A; A/B=347-624.
3D structure databasesPDB 2E3S; X-ray; 1.94 A; A=347-624.
3D structure databasesPDB 2RSG; NMR; -; A=24-117.
3D structure databasesPDB 2Z9Y; X-ray; 1.80 A; A=347-624.
3D structure databasesPDB 2Z9Z; X-ray; 1.74 A; A=347-624.
3D structure databasesPDB 3H3Q; X-ray; 2.00 A; A/B=347-624.
3D structure databasesPDB 3H3R; X-ray; 1.85 A; A/B=347-624.
3D structure databasesPDB 3H3S; X-ray; 1.66 A; A/B=347-624.
3D structure databasesPDB 3H3T; X-ray; 2.40 A; A/B=347-624.
3D structure databasesPDB 4HHV; X-ray; 1.75 A; A/B=20-121.
3D structure databasesPDBsum 2E3M; -.
3D structure databasesPDBsum 2E3N; -.
3D structure databasesPDBsum 2E3O; -.
3D structure databasesPDBsum 2E3P; -.
3D structure databasesPDBsum 2E3Q; -.
3D structure databasesPDBsum 2E3R; -.
3D structure databasesPDBsum 2E3S; -.
3D structure databasesPDBsum 2RSG; -.
3D structure databasesPDBsum 2Z9Y; -.
3D structure databasesPDBsum 2Z9Z; -.
3D structure databasesPDBsum 3H3Q; -.
3D structure databasesPDBsum 3H3R; -.
3D structure databasesPDBsum 3H3S; -.
3D structure databasesPDBsum 3H3T; -.
3D structure databasesPDBsum 4HHV; -.
3D structure databasesProteinModelPortal Q9Y5P4; -.
3D structure databasesSMR Q9Y5P4; 20-121, 391-624.
Phylogenomic databaseseggNOG NOG238964; -.
Phylogenomic databasesGeneTree ENSGT00650000093230; -.
Phylogenomic databasesHOVERGEN HBG050753; -.
Phylogenomic databasesInParanoid Q9Y5P4; -.
Phylogenomic databasesKO K08283; -.
Phylogenomic databasesOMA WPTSMPS; -.
Phylogenomic databasesOrthoDB EOG7G7KNJ; -.
Phylogenomic databasesPhylomeDB Q9Y5P4; -.
Phylogenomic databasesTreeFam TF106160; -.
Organism-specific databasesCTD 10087; -.
Organism-specific databasesGeneCards GC05M074664; -.
Organism-specific databasesHGNC HGNC:2205; COL4A3BP.
Organism-specific databasesHPA HPA035645; -.
Organism-specific databasesMIM 604677; gene.
Organism-specific databasesneXtProt NX_Q9Y5P4; -.
Organism-specific databasesPharmGKB PA26720; -.
OtherEvolutionaryTrace Q9Y5P4; -.
OtherGeneWiki COL4A3BP; -.
OtherGenomeRNAi 10087; -.
OtherNextBio 38145; -.
OtherPRO PR:Q9Y5P4; -.



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