Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 2395
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000377270; ENSP00000366482; ENSG00000165060. [Q16595-1]
Genome annotation databasesEnsembl ENST00000396364; ENSP00000379650; ENSG00000165060. [Q16595-2]
Genome annotation databasesEnsembl ENST00000396366; ENSP00000379652; ENSG00000165060. [Q16595-3]
Genome annotation databasesGeneID 2395; -.
Genome annotation databasesKEGG hsa:2395; -.
Genome annotation databasesUCSC uc004aha.2; human. [Q16595-1]
Genome annotation databasesUCSC uc011lrr.1; human. [Q16595-2]
Sequence databasesCCDS CCDS43834.1; -. [Q16595-3]
Sequence databasesCCDS CCDS55313.1; -. [Q16595-2]
Sequence databasesCCDS CCDS6626.1; -. [Q16595-1]
Sequence databasesEMBL U43747; AAA98510.1; -; mRNA.
Sequence databasesEMBL U43752; AAA98508.1; -; Genomic_DNA.
Sequence databasesEMBL U43748; AAA98508.1; JOINED; Genomic_DNA.
Sequence databasesEMBL U43749; AAA98508.1; JOINED; Genomic_DNA.
Sequence databasesEMBL U43750; AAA98508.1; JOINED; Genomic_DNA.
Sequence databasesEMBL U43751; AAA98508.1; JOINED; Genomic_DNA.
Sequence databasesEMBL U43753; AAA98509.1; -; Genomic_DNA.
Sequence databasesEMBL U43748; AAA98509.1; JOINED; Genomic_DNA.
Sequence databasesEMBL U43749; AAA98509.1; JOINED; Genomic_DNA.
Sequence databasesEMBL U43750; AAA98509.1; JOINED; Genomic_DNA.
Sequence databasesEMBL U43751; AAA98509.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL162730; CAH71829.1; -; Genomic_DNA.
Sequence databasesEMBL BC023633; AAH23633.1; -; mRNA.
Sequence databasesEMBL BC048097; AAH48097.1; -; mRNA.
Sequence databasesEMBL Y13751; CAA74077.1; -; Genomic_DNA.
Sequence databasesEMBL AF028240; AAB84047.1; -; Genomic_DNA.
Sequence databasesEMBL U93173; AAD00734.1; -; Genomic_DNA.
Sequence databasesRefSeq NP_000135.2; NM_000144.4. [Q16595-1]
Sequence databasesRefSeq NP_001155178.1; NM_001161706.1. [Q16595-2]
Sequence databasesRefSeq NP_852090.1; NM_181425.2. [Q16595-3]
Sequence databasesUniGene Hs.20685; -.
Gene expression databasesBgee Q16595; -.
Gene expression databasesCleanEx HS_FXN; -.
Gene expression databasesExpressionAtlas Q16595; baseline and differential.
Gene expression databasesGenevestigator Q16595; -.
OntologiesGO GO:0005829; C:cytosol; IDA:BHF-UCL.
OntologiesGO GO:0005759; C:mitochondrial matrix; ISS:BHF-UCL.
OntologiesGO GO:0005739; C:mitochondrion; IDA:BHF-UCL.
OntologiesGO GO:0051537; F:2 iron, 2 sulfur cluster binding; IDA:BHF-UCL.
OntologiesGO GO:0008199; F:ferric iron binding; IDA:BHF-UCL.
OntologiesGO GO:0008198; F:ferrous iron binding; IDA:BHF-UCL.
OntologiesGO GO:0004322; F:ferroxidase activity; IDA:UniProtKB.
OntologiesGO GO:0034986; F:iron chaperone activity; IDA:BHF-UCL.
OntologiesGO GO:0051536; F:iron-sulfur cluster binding; IDA:BHF-UCL.
OntologiesGO GO:0007628; P:adult walking behavior; IEA:Ensembl.
OntologiesGO GO:0009060; P:aerobic respiration; IEA:Ensembl.
OntologiesGO GO:0006879; P:cellular iron ion homeostasis; IMP:BHF-UCL.
OntologiesGO GO:0070301; P:cellular response to hydrogen peroxide; IDA:UniProtKB.
OntologiesGO GO:0009792; P:embryo development ending in birth or egg hatching; IEA:Ensembl.
OntologiesGO GO:0006783; P:heme biosynthetic process; NAS:BHF-UCL.
OntologiesGO GO:0006811; P:ion transport; IEA:UniProtKB-KW.
OntologiesGO GO:0018283; P:iron incorporation into metallo-sulfur cluster; IDA:BHF-UCL.
OntologiesGO GO:0007005; P:mitochondrion organization; IEA:Ensembl.
OntologiesGO GO:0043066; P:negative regulation of apoptotic process; IMP:UniProtKB.
OntologiesGO GO:0040015; P:negative regulation of multicellular organism growth; IEA:Ensembl.
OntologiesGO GO:0046621; P:negative regulation of organ growth; IEA:Ensembl.
OntologiesGO GO:0090201; P:negative regulation of release of cytochrome c from mitochondria; IMP:UniProtKB.
OntologiesGO GO:0006119; P:oxidative phosphorylation; IEA:Ensembl.
OntologiesGO GO:0030307; P:positive regulation of cell growth; IMP:BHF-UCL.
OntologiesGO GO:0008284; P:positive regulation of cell proliferation; IMP:BHF-UCL.
OntologiesGO GO:0051349; P:positive regulation of lyase activity; IDA:UniProtKB.
OntologiesGO GO:0048554; P:positive regulation of metalloenzyme activity; IMP:BHF-UCL.
OntologiesGO GO:0051353; P:positive regulation of oxidoreductase activity; IMP:BHF-UCL.
OntologiesGO GO:0051347; P:positive regulation of transferase activity; IMP:BHF-UCL.
OntologiesGO GO:0019230; P:proprioception; IEA:Ensembl.
OntologiesGO GO:0016540; P:protein autoprocessing; IDA:BHF-UCL.
OntologiesGO GO:0010722; P:regulation of ferrochelatase activity; IDA:BHF-UCL.
OntologiesGO GO:0010039; P:response to iron ion; IMP:BHF-UCL.
OntologiesGO GO:0044281; P:small molecule metabolic process; TAS:Reactome.
Proteomic databasesMaxQB Q16595; -.
Proteomic databasesPaxDb Q16595; -.
Proteomic databasesPeptideAtlas Q16595; -.
Proteomic databasesPRIDE Q16595; -.
Protein family/group databasesTCDB 9.B.21.1.1; the frataxin (frataxin) family.
Family and domain databasesGene3D 3.30.920.10; -; 1.
Family and domain databasesInterPro IPR017789; Frataxin.
Family and domain databasesInterPro IPR002908; Frataxin/CyaY.
Family and domain databasesInterPro IPR020895; Frataxin_CS.
Family and domain databasesPANTHER PTHR16821; PTHR16821; 1.
Family and domain databasesPfam PF01491; Frataxin_Cyay; 1.
Family and domain databasesPRINTS PR00904; FRATAXIN.
Family and domain databasesPROSITE PS01344; FRATAXIN_1; 1.
Family and domain databasesPROSITE PS50810; FRATAXIN_2; 1.
Family and domain databasesSUPFAM SSF55387; SSF55387; 1.
Family and domain databasesTIGRFAMs TIGR03421; FeS_CyaY; 1.
Family and domain databasesTIGRFAMs TIGR03422; mito_frataxin; 1.
PTM databasesPhosphoSite Q16595; -.
Protein-protein interaction databasesBioGrid 108677; 5.
Protein-protein interaction databasesIntAct Q16595; 5.
Protein-protein interaction databasesMINT MINT-2856590; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000366482; -.
Enzyme and pathway databasesReactome REACT_118595; Mitochondrial protein import.
Enzyme and pathway databasesReactome REACT_150353; Mitochondrial iron-sulfur cluster biogenesis.
2D gel databasesOGP Q16595; -.
3D structure databasesDisProt DP00607; -.
3D structure databasesPDB 1EKG; X-ray; 1.80 A; A=86-210.
3D structure databasesPDB 1LY7; NMR; -; A=91-210.
3D structure databasesPDB 3S4M; X-ray; 1.30 A; A=82-210.
3D structure databasesPDB 3S5D; X-ray; 1.50 A; A=82-210.
3D structure databasesPDB 3S5E; X-ray; 1.31 A; A=82-210.
3D structure databasesPDB 3S5F; X-ray; 1.50 A; A/B=82-210.
3D structure databasesPDB 3T3J; X-ray; 1.70 A; A=82-210.
3D structure databasesPDB 3T3K; X-ray; 1.24 A; A=82-210.
3D structure databasesPDB 3T3L; X-ray; 1.15 A; A=82-210.
3D structure databasesPDB 3T3T; X-ray; 1.38 A; A/B/C/D=82-210.
3D structure databasesPDB 3T3X; X-ray; 1.57 A; A/B=82-210.
3D structure databasesPDBsum 1EKG; -.
3D structure databasesPDBsum 1LY7; -.
3D structure databasesPDBsum 3S4M; -.
3D structure databasesPDBsum 3S5D; -.
3D structure databasesPDBsum 3S5E; -.
3D structure databasesPDBsum 3S5F; -.
3D structure databasesPDBsum 3T3J; -.
3D structure databasesPDBsum 3T3K; -.
3D structure databasesPDBsum 3T3L; -.
3D structure databasesPDBsum 3T3T; -.
3D structure databasesPDBsum 3T3X; -.
3D structure databasesProteinModelPortal Q16595; -.
3D structure databasesSMR Q16595; 89-209.
Protocols and materials databasesDNASU 2395; -.
Phylogenomic databaseseggNOG COG1965; -.
Phylogenomic databasesGeneTree ENSGT00390000005811; -.
Phylogenomic databasesHOGENOM HOG000190729; -.
Phylogenomic databasesHOVERGEN HBG005745; -.
Phylogenomic databasesInParanoid Q16595; -.
Phylogenomic databasesOMA KQSVCLM; -.
Phylogenomic databasesOrthoDB EOG7HHWVD; -.
Phylogenomic databasesPhylomeDB Q16595; -.
Phylogenomic databasesTreeFam TF318958; -.
Organism-specific databasesCTD 2395; -.
Organism-specific databasesGeneCards GC09P071650; -.
Organism-specific databasesGeneReviews FXN; -.
Organism-specific databasesHGNC HGNC:3951; FXN.
Organism-specific databasesHPA CAB022164; -.
Organism-specific databasesMIM 229300; phenotype.
Organism-specific databasesMIM 606829; gene.
Organism-specific databasesneXtProt NX_Q16595; -.
Organism-specific databasesOrphanet 95; Friedreich ataxia.
Organism-specific databasesPharmGKB PA28369; -.
ChemistryChEMBL CHEMBL2321640; -.
OtherChiTaRS FXN; human.
OtherEvolutionaryTrace Q16595; -.
OtherGeneWiki Frataxin; -.
OtherGenomeRNAi 2395; -.
OtherNextBio 9641; -.
OtherPRO PR:Q16595; -.



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