Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 3091
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000323441; ENSP00000323326; ENSG00000100644. [Q16665-2]
Genome annotation databasesEnsembl ENST00000337138; ENSP00000338018; ENSG00000100644. [Q16665-1]
Genome annotation databasesEnsembl ENST00000539097; ENSP00000437955; ENSG00000100644. [Q16665-3]
Genome annotation databasesGeneID 3091; -.
Genome annotation databasesKEGG hsa:3091; -.
Genome annotation databasesUCSC uc001xfq.2; human. [Q16665-1]
Genome annotation databasesUCSC uc021rua.1; human.
Sequence databasesCCDS CCDS58324.1; -. [Q16665-3]
Sequence databasesCCDS CCDS9753.1; -. [Q16665-1]
Sequence databasesCCDS CCDS9754.1; -. [Q16665-2]
Sequence databasesEMBL U22431; AAC50152.1; -; mRNA.
Sequence databasesEMBL U29165; AAC51210.1; -; mRNA.
Sequence databasesEMBL AF050127; AAC68568.1; -; Genomic_DNA.
Sequence databasesEMBL AF050115; AAC68568.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF050116; AAC68568.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF050117; AAC68568.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF050118; AAC68568.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF050119; AAC68568.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF050120; AAC68568.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF050121; AAC68568.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF050122; AAC68568.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF050123; AAC68568.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF050124; AAC68568.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF050125; AAC68568.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF050126; AAC68568.1; JOINED; Genomic_DNA.
Sequence databasesEMBL FJ790247; ACN88547.1; -; mRNA.
Sequence databasesEMBL AF207601; AAF20139.1; -; mRNA.
Sequence databasesEMBL AF207602; AAF20140.1; -; mRNA.
Sequence databasesEMBL AF208487; AAF20149.1; -; Genomic_DNA.
Sequence databasesEMBL AF304431; AAG43026.1; -; mRNA.
Sequence databasesEMBL AB073325; BAB70608.1; -; mRNA.
Sequence databasesEMBL BT009776; AAP88778.1; -; mRNA.
Sequence databasesEMBL AL137129; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL BC012527; AAH12527.1; -; mRNA.
Sequence databasesPIR I38972; I38972.
Sequence databasesRefSeq NP_001230013.1; NM_001243084.1. [Q16665-3]
Sequence databasesRefSeq NP_001521.1; NM_001530.3. [Q16665-1]
Sequence databasesRefSeq NP_851397.1; NM_181054.2. [Q16665-2]
Sequence databasesUniGene Hs.597216; -.
Sequence databasesUniGene Hs.719495; -.
Polymorphism databasesDMDM 2498017; -.
Gene expression databasesBgee Q16665; -.
Gene expression databasesCleanEx HS_HIF1A; -.
Gene expression databasesExpressionAtlas Q16665; baseline and differential.
Gene expression databasesGenevestigator Q16665; -.
OntologiesGO GO:0005737; C:cytoplasm; IDA:BHF-UCL.
OntologiesGO GO:0005829; C:cytosol; IDA:UniProtKB.
OntologiesGO GO:0031514; C:motile cilium; IEA:Ensembl.
OntologiesGO GO:0005730; C:nucleolus; IDA:HPA.
OntologiesGO GO:0005654; C:nucleoplasm; TAS:Reactome.
OntologiesGO GO:0005634; C:nucleus; IDA:UniProtKB.
OntologiesGO GO:0005667; C:transcription factor complex; IPI:MGI.
OntologiesGO GO:0019899; F:enzyme binding; IPI:UniProtKB.
OntologiesGO GO:0035035; F:histone acetyltransferase binding; IPI:UniProtKB.
OntologiesGO GO:0051879; F:Hsp90 protein binding; IDA:BHF-UCL.
OntologiesGO GO:0035257; F:nuclear hormone receptor binding; IPI:UniProtKB.
OntologiesGO GO:0046982; F:protein heterodimerization activity; IPI:UniProtKB.
OntologiesGO GO:0019901; F:protein kinase binding; IPI:UniProtKB.
OntologiesGO GO:0001077; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription; IEA:Ensembl.
OntologiesGO GO:0003705; F:RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity; IDA:BHF-UCL.
OntologiesGO GO:0001076; F:RNA polymerase II transcription factor binding transcription factor activity; IEA:Ensembl.
OntologiesGO GO:0043565; F:sequence-specific DNA binding; IEA:Ensembl.
OntologiesGO GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:UniProtKB.
OntologiesGO GO:0004871; F:signal transducer activity; IEA:InterPro.
OntologiesGO GO:0008134; F:transcription factor binding; IPI:BHF-UCL.
OntologiesGO GO:0000989; F:transcription factor binding transcription factor activity; IDA:BHF-UCL.
OntologiesGO GO:0031625; F:ubiquitin protein ligase binding; IPI:UniProtKB.
OntologiesGO GO:0001525; P:angiogenesis; IEA:Ensembl.
OntologiesGO GO:0019896; P:axon transport of mitochondrion; IMP:UniProtKB.
OntologiesGO GO:0001922; P:B-1 B cell homeostasis; IEA:Ensembl.
OntologiesGO GO:0003208; P:cardiac ventricle morphogenesis; IEA:Ensembl.
OntologiesGO GO:0051216; P:cartilage development; IEA:Ensembl.
OntologiesGO GO:0006879; P:cellular iron ion homeostasis; IEA:Ensembl.
OntologiesGO GO:0071456; P:cellular response to hypoxia; IDA:UniProtKB.
OntologiesGO GO:0071347; P:cellular response to interleukin-1; IEP:BHF-UCL.
OntologiesGO GO:0021987; P:cerebral cortex development; IEA:Ensembl.
OntologiesGO GO:0032963; P:collagen metabolic process; ISS:BHF-UCL.
OntologiesGO GO:0002248; P:connective tissue replacement involved in inflammatory response wound healing; ISS:BHF-UCL.
OntologiesGO GO:0048546; P:digestive tract morphogenesis; IEA:Ensembl.
OntologiesGO GO:0071542; P:dopaminergic neuron differentiation; IEA:Ensembl.
OntologiesGO GO:0051541; P:elastin metabolic process; ISS:BHF-UCL.
OntologiesGO GO:0035162; P:embryonic hemopoiesis; IEA:Ensembl.
OntologiesGO GO:0001892; P:embryonic placenta development; IEA:Ensembl.
OntologiesGO GO:0061030; P:epithelial cell differentiation involved in mammary gland alveolus development; IEA:Ensembl.
OntologiesGO GO:0001837; P:epithelial to mesenchymal transition; ISS:BHF-UCL.
OntologiesGO GO:0042593; P:glucose homeostasis; IEA:Ensembl.
OntologiesGO GO:0001947; P:heart looping; IEA:Ensembl.
OntologiesGO GO:0042541; P:hemoglobin biosynthetic process; IEA:Ensembl.
OntologiesGO GO:0060574; P:intestinal epithelial cell maturation; IEA:Ensembl.
OntologiesGO GO:0006089; P:lactate metabolic process; IEA:Ensembl.
OntologiesGO GO:0007595; P:lactation; IEA:Ensembl.
OntologiesGO GO:0042789; P:mRNA transcription from RNA polymerase II promoter; IC:BHF-UCL.
OntologiesGO GO:0046716; P:muscle cell cellular homeostasis; IEA:Ensembl.
OntologiesGO GO:0030502; P:negative regulation of bone mineralization; IEA:Ensembl.
OntologiesGO GO:0045926; P:negative regulation of growth; IEA:Ensembl.
OntologiesGO GO:2001054; P:negative regulation of mesenchymal cell apoptotic process; IEA:Ensembl.
OntologiesGO GO:0043524; P:negative regulation of neuron apoptotic process; IEA:Ensembl.
OntologiesGO GO:1903377; P:negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway; IDA:ParkinsonsUK-UCL.
OntologiesGO GO:0070244; P:negative regulation of thymocyte apoptotic process; IEA:Ensembl.
OntologiesGO GO:0032007; P:negative regulation of TOR signaling; IEA:Ensembl.
OntologiesGO GO:0001755; P:neural crest cell migration; IEA:Ensembl.
OntologiesGO GO:0021502; P:neural fold elevation formation; IEA:Ensembl.
OntologiesGO GO:0007219; P:Notch signaling pathway; TAS:Reactome.
OntologiesGO GO:0003151; P:outflow tract morphogenesis; IEA:Ensembl.
OntologiesGO GO:0032364; P:oxygen homeostasis; IDA:HGNC.
OntologiesGO GO:0045766; P:positive regulation of angiogenesis; IC:BHF-UCL.
OntologiesGO GO:0032722; P:positive regulation of chemokine production; TAS:BHF-UCL.
OntologiesGO GO:0070101; P:positive regulation of chemokine-mediated signaling pathway; IC:BHF-UCL.
OntologiesGO GO:0001938; P:positive regulation of endothelial cell proliferation; IC:BHF-UCL.
OntologiesGO GO:0010634; P:positive regulation of epithelial cell migration; ISS:BHF-UCL.
OntologiesGO GO:0045648; P:positive regulation of erythrocyte differentiation; IC:BHF-UCL.
OntologiesGO GO:0045821; P:positive regulation of glycolytic process; IC:BHF-UCL.
OntologiesGO GO:0046886; P:positive regulation of hormone biosynthetic process; IDA:BHF-UCL.
OntologiesGO GO:0035774; P:positive regulation of insulin secretion involved in cellular response to glucose stimulus; IEA:Ensembl.
OntologiesGO GO:0002052; P:positive regulation of neuroblast proliferation; IEA:Ensembl.
OntologiesGO GO:0051000; P:positive regulation of nitric-oxide synthase activity; TAS:BHF-UCL.
OntologiesGO GO:0010870; P:positive regulation of receptor biosynthetic process; IMP:BHF-UCL.
OntologiesGO GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.
OntologiesGO GO:0061419; P:positive regulation of transcription from RNA polymerase II promoter in response to hypoxia; IMP:UniProtKB.
OntologiesGO GO:0045893; P:positive regulation of transcription, DNA-templated; IDA:UniProtKB.
OntologiesGO GO:0030949; P:positive regulation of vascular endothelial growth factor receptor signaling pathway; IC:BHF-UCL.
OntologiesGO GO:0010575; P:positive regulation vascular endothelial growth factor production; IMP:UniProtKB.
OntologiesGO GO:0010468; P:regulation of gene expression; IDA:UniProtKB.
OntologiesGO GO:0061418; P:regulation of transcription from RNA polymerase II promoter in response to hypoxia; TAS:Reactome.
OntologiesGO GO:0043619; P:regulation of transcription from RNA polymerase II promoter in response to oxidative stress; IDA:BHF-UCL.
OntologiesGO GO:0006355; P:regulation of transcription, DNA-templated; IDA:UniProtKB.
OntologiesGO GO:0032909; P:regulation of transforming growth factor beta2 production; IMP:BHF-UCL.
OntologiesGO GO:0001666; P:response to hypoxia; IDA:UniProtKB.
OntologiesGO GO:0014850; P:response to muscle activity; IEA:Ensembl.
OntologiesGO GO:0061298; P:retina vasculature development in camera-type eye; IEA:Ensembl.
OntologiesGO GO:0007165; P:signal transduction; IMP:BHF-UCL.
OntologiesGO GO:0010573; P:vascular endothelial growth factor production; IDA:BHF-UCL.
OntologiesGO GO:0008542; P:visual learning; IEA:Ensembl.
Proteomic databasesMaxQB Q16665; -.
Proteomic databasesPaxDb Q16665; -.
Proteomic databasesPRIDE Q16665; -.
Family and domain databasesInterPro IPR011598; bHLH_dom.
Family and domain databasesInterPro IPR001321; HIF-1_alpha.
Family and domain databasesInterPro IPR014887; HIF-1_TAD_C.
Family and domain databasesInterPro IPR021537; HIF_alpha_subunit.
Family and domain databasesInterPro IPR001610; PAC.
Family and domain databasesInterPro IPR000014; PAS.
Family and domain databasesInterPro IPR013767; PAS_fold.
Family and domain databasesPfam PF11413; HIF-1; 1.
Family and domain databasesPfam PF08778; HIF-1a_CTAD; 1.
Family and domain databasesPfam PF00989; PAS; 1.
Family and domain databasesPRINTS PR01080; HYPOXIAIF1A.
Family and domain databasesPROSITE PS50888; BHLH; 1.
Family and domain databasesPROSITE PS50112; PAS; 2.
Family and domain databasesSMART SM00353; HLH; 1.
Family and domain databasesSMART SM00086; PAC; 1.
Family and domain databasesSMART SM00091; PAS; 2.
Family and domain databasesSUPFAM SSF47459; SSF47459; 1.
Family and domain databasesSUPFAM SSF55785; SSF55785; 2.
Family and domain databasesTIGRFAMs TIGR00229; sensory_box; 2.
PTM databasesPhosphoSite Q16665; -.
Protein-protein interaction databasesBioGrid 109338; 116.
Protein-protein interaction databasesDIP DIP-29722N; -.
Protein-protein interaction databasesIntAct Q16665; 60.
Protein-protein interaction databasesMINT MINT-133270; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000338018; -.
Enzyme and pathway databasesReactome REACT_118780; NOTCH1 Intracellular Domain Regulates Transcription.
Enzyme and pathway databasesReactome REACT_120916; Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha.
Enzyme and pathway databasesReactome REACT_121092; Regulation of gene expression by Hypoxia-inducible Factor.
Enzyme and pathway databasesReactome REACT_121226; Oxygen-dependent asparagine hydroxylation of Hypoxia-inducible Factor Alpha.
Enzyme and pathway databasesReactome REACT_24941; Circadian Clock.
Enzyme and pathway databasesSignaLink Q16665; -.
3D structure databasesDisProt DP00262; -.
3D structure databasesPDB 1D7G; Model; -; D=15-73.
3D structure databasesPDB 1H2K; X-ray; 2.15 A; S=786-826.
3D structure databasesPDB 1H2L; X-ray; 2.25 A; S=786-826.
3D structure databasesPDB 1H2M; X-ray; 2.50 A; S=775-826.
3D structure databasesPDB 1L3E; NMR; -; A=786-826.
3D structure databasesPDB 1L8C; NMR; -; B=776-826.
3D structure databasesPDB 1LM8; X-ray; 1.85 A; H=556-575.
3D structure databasesPDB 1LQB; X-ray; 2.00 A; D=549-582.
3D structure databasesPDB 2ILM; X-ray; 2.30 A; S=786-826.
3D structure databasesPDB 3HQR; X-ray; 2.00 A; S=558-574.
3D structure databasesPDB 3HQU; X-ray; 2.30 A; S=558-574.
3D structure databasesPDB 4AJY; X-ray; 1.73 A; H=559-577.
3D structure databasesPDB 4H6J; X-ray; 1.52 A; A=238-348.
3D structure databasesPDBsum 1D7G; -.
3D structure databasesPDBsum 1H2K; -.
3D structure databasesPDBsum 1H2L; -.
3D structure databasesPDBsum 1H2M; -.
3D structure databasesPDBsum 1L3E; -.
3D structure databasesPDBsum 1L8C; -.
3D structure databasesPDBsum 1LM8; -.
3D structure databasesPDBsum 1LQB; -.
3D structure databasesPDBsum 2ILM; -.
3D structure databasesPDBsum 3HQR; -.
3D structure databasesPDBsum 3HQU; -.
3D structure databasesPDBsum 4AJY; -.
3D structure databasesPDBsum 4H6J; -.
3D structure databasesProteinModelPortal Q16665; -.
3D structure databasesSMR Q16665; 19-374, 776-826.
Protocols and materials databasesDNASU 3091; -.
Phylogenomic databaseseggNOG NOG289264; -.
Phylogenomic databasesGeneTree ENSGT00760000118788; -.
Phylogenomic databasesHOGENOM HOG000234306; -.
Phylogenomic databasesHOVERGEN HBG060456; -.
Phylogenomic databasesInParanoid Q16665; -.
Phylogenomic databasesKO K08268; -.
Phylogenomic databasesOMA QNAQRKR; -.
Phylogenomic databasesOrthoDB EOG7JDQX8; -.
Phylogenomic databasesPhylomeDB Q16665; -.
Phylogenomic databasesTreeFam TF317772; -.
Organism-specific databasesCTD 3091; -.
Organism-specific databasesGeneCards GC14P062162; -.
Organism-specific databasesHGNC HGNC:4910; HIF1A.
Organism-specific databasesHPA CAB017442; -.
Organism-specific databasesHPA HPA001275; -.
Organism-specific databasesMIM 603348; gene.
Organism-specific databasesneXtProt NX_Q16665; -.
Organism-specific databasesPharmGKB PA29283; -.
ChemistryBindingDB Q16665; -.
ChemistryChEMBL CHEMBL2221345; -.
ChemistryDrugBank DB01136; Carvedilol.
OtherChiTaRS HIF1A; human.
OtherEvolutionaryTrace Q16665; -.
OtherGeneWiki HIF1A; -.
OtherGenomeRNAi 3091; -.
OtherNextBio 12265; -.
OtherPRO PR:Q16665; -.



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