Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 3939
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000227157; ENSP00000227157; ENSG00000134333. [P00338-5]
Genome annotation databasesEnsembl ENST00000379412; ENSP00000368722; ENSG00000134333. [P00338-1]
Genome annotation databasesEnsembl ENST00000396222; ENSP00000379524; ENSG00000134333. [P00338-2]
Genome annotation databasesEnsembl ENST00000422447; ENSP00000395337; ENSG00000134333. [P00338-1]
Genome annotation databasesEnsembl ENST00000430553; ENSP00000406172; ENSG00000134333. [P00338-4]
Genome annotation databasesEnsembl ENST00000540430; ENSP00000445175; ENSG00000134333. [P00338-3]
Genome annotation databasesEnsembl ENST00000542179; ENSP00000445331; ENSG00000134333. [P00338-1]
Genome annotation databasesGeneID 3939; -.
Genome annotation databasesKEGG hsa:3939; -.
Genome annotation databasesUCSC uc001mok.3; human. [P00338-1]
Genome annotation databasesUCSC uc001mol.3; human. [P00338-5]
Genome annotation databasesUCSC uc009yho.2; human. [P00338-4]
Genome annotation databasesUCSC uc010rdd.2; human. [P00338-3]
Genome annotation databasesUCSC uc021qep.1; human. [P00338-2]
Sequence databasesCCDS CCDS44549.1; -. [P00338-4]
Sequence databasesCCDS CCDS53609.1; -. [P00338-3]
Sequence databasesCCDS CCDS53610.1; -. [P00338-2]
Sequence databasesCCDS CCDS53611.1; -. [P00338-5]
Sequence databasesCCDS CCDS7839.1; -. [P00338-1]
Sequence databasesEMBL X02152; CAA26088.1; -; mRNA.
Sequence databasesEMBL X03077; CAA26879.1; -; Genomic_DNA.
Sequence databasesEMBL X03078; CAA26879.1; JOINED; Genomic_DNA.
Sequence databasesEMBL X03079; CAA26879.1; JOINED; Genomic_DNA.
Sequence databasesEMBL X03080; CAA26879.1; JOINED; Genomic_DNA.
Sequence databasesEMBL X03081; CAA26879.1; JOINED; Genomic_DNA.
Sequence databasesEMBL X03082; CAA26879.1; JOINED; Genomic_DNA.
Sequence databasesEMBL X03083; CAA26879.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AY423727; AAS00490.1; -; mRNA.
Sequence databasesEMBL AK130587; BAC85389.1; -; mRNA.
Sequence databasesEMBL AK296667; BAG59264.1; -; mRNA.
Sequence databasesEMBL AK298834; BAH12879.1; -; mRNA.
Sequence databasesEMBL CR456775; CAG33056.1; -; mRNA.
Sequence databasesEMBL CR541714; CAG46515.1; -; mRNA.
Sequence databasesEMBL AK223078; BAD96798.1; -; mRNA.
Sequence databasesEMBL AC084117; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL CH471064; EAW68395.1; -; Genomic_DNA.
Sequence databasesEMBL CH471064; EAW68396.1; -; Genomic_DNA.
Sequence databasesEMBL BC067223; AAH67223.1; -; mRNA.
Sequence databasesEMBL S66853; AAB20418.1; -; Genomic_DNA.
Sequence databasesPIR A00347; DEHULM.
Sequence databasesRefSeq NP_001128711.1; NM_001135239.1. [P00338-4]
Sequence databasesRefSeq NP_001158886.1; NM_001165414.1. [P00338-3]
Sequence databasesRefSeq NP_001158887.1; NM_001165415.1. [P00338-2]
Sequence databasesRefSeq NP_001158888.1; NM_001165416.1. [P00338-5]
Sequence databasesRefSeq NP_005557.1; NM_005566.3. [P00338-1]
Sequence databasesUniGene Hs.2795; -.
Polymorphism databasesDMDM 126047; -.
Gene expression databasesBgee P00338; -.
Gene expression databasesCleanEx HS_LDHA; -.
Gene expression databasesExpressionAtlas P00338; baseline and differential.
Gene expression databasesGenevestigator P00338; -.
OntologiesGO GO:0005829; C:cytosol; TAS:Reactome.
OntologiesGO GO:0070062; C:extracellular vesicular exosome; IDA:UniProtKB.
OntologiesGO GO:0016020; C:membrane; IDA:UniProtKB.
OntologiesGO GO:0005739; C:mitochondrion; IEA:Ensembl.
OntologiesGO GO:0005634; C:nucleus; IDA:UniProt.
OntologiesGO GO:0035686; C:sperm fibrous sheath; IEA:Ensembl.
OntologiesGO GO:0004459; F:L-lactate dehydrogenase activity; NAS:UniProtKB.
OntologiesGO GO:0044262; P:cellular carbohydrate metabolic process; IEA:InterPro.
OntologiesGO GO:0044237; P:cellular metabolic process; TAS:Reactome.
OntologiesGO GO:0031668; P:cellular response to extracellular stimulus; IEA:Ensembl.
OntologiesGO GO:0006096; P:glycolytic process; NAS:UniProtKB.
OntologiesGO GO:0006090; P:pyruvate metabolic process; TAS:Reactome.
OntologiesGO GO:0044281; P:small molecule metabolic process; TAS:Reactome.
OntologiesGO GO:0021762; P:substantia nigra development; IEP:UniProtKB.
Proteomic databasesMaxQB P00338; -.
Proteomic databasesPaxDb P00338; -.
Proteomic databasesPeptideAtlas P00338; -.
Proteomic databasesPRIDE P00338; -.
Family and domain databasesGene3D 3.40.50.720; -; 1.
Family and domain databasesGene3D 3.90.110.10; -; 1.
Family and domain databasesHAMAP MF_00488; Lactate_dehydrog; 1.
Family and domain databasesInterPro IPR001557; L-lactate/malate_DH.
Family and domain databasesInterPro IPR011304; L-lactate_DH.
Family and domain databasesInterPro IPR018177; L-lactate_DH_AS.
Family and domain databasesInterPro IPR022383; Lactate/malate_DH_C.
Family and domain databasesInterPro IPR001236; Lactate/malate_DH_N.
Family and domain databasesInterPro IPR015955; Lactate_DH/Glyco_Ohase_4_C.
Family and domain databasesInterPro IPR016040; NAD(P)-bd_dom.
Family and domain databasesPANTHER PTHR11540; PTHR11540; 1.
Family and domain databasesPfam PF02866; Ldh_1_C; 1.
Family and domain databasesPfam PF00056; Ldh_1_N; 1.
Family and domain databasesPIRSF PIRSF000102; Lac_mal_DH; 1.
Family and domain databasesPRINTS PR00086; LLDHDRGNASE.
Family and domain databasesPROSITE PS00064; L_LDH; 1.
Family and domain databasesSUPFAM SSF56327; SSF56327; 1.
Family and domain databasesTIGRFAMs TIGR01771; L-LDH-NAD; 1.
PTM databasesPhosphoSite P00338; -.
Protein-protein interaction databasesBioGrid 110131; 67.
Protein-protein interaction databasesIntAct P00338; 18.
Protein-protein interaction databasesMINT MINT-4998672; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000395337; -.
Enzyme and pathway databasesReactome REACT_2071; Pyruvate metabolism.
Enzyme and pathway databasesSABIO-RK P00338; -.
Enzyme and pathway databasesUniPathway UPA00554; UER00611.
2D gel databasesDOSAC-COBS-2DPAGE P00338; -.
2D gel databasesOGP P00338; -.
2D gel databasesREPRODUCTION-2DPAGE IPI00217966; -.
3D structure databasesPDB 1I10; X-ray; 2.30 A; A/B/C/D/E/F/G/H=2-332.
3D structure databasesPDB 4AJP; X-ray; 2.38 A; A/B/C/D=2-332.
3D structure databasesPDB 4JNK; X-ray; 1.90 A; A/B/C/D=2-332.
3D structure databasesPDB 4L4R; X-ray; 2.10 A; A/H=2-332.
3D structure databasesPDB 4L4S; X-ray; 2.90 A; A/H=2-332.
3D structure databasesPDB 4M49; X-ray; 2.05 A; A/B/C/D=2-332.
3D structure databasesPDB 4QO7; X-ray; 2.14 A; A/B/C/D=2-332.
3D structure databasesPDB 4QO8; X-ray; 2.00 A; A/B/C/D=2-332.
3D structure databasesPDBsum 1I10; -.
3D structure databasesPDBsum 4AJP; -.
3D structure databasesPDBsum 4JNK; -.
3D structure databasesPDBsum 4L4R; -.
3D structure databasesPDBsum 4L4S; -.
3D structure databasesPDBsum 4M49; -.
3D structure databasesPDBsum 4QO7; -.
3D structure databasesPDBsum 4QO8; -.
3D structure databasesProteinModelPortal P00338; -.
3D structure databasesSMR P00338; 2-332.
Protocols and materials databasesDNASU 3939; -.
Phylogenomic databaseseggNOG COG0039; -.
Phylogenomic databasesGeneTree ENSGT00550000074541; -.
Phylogenomic databasesHOGENOM HOG000213793; -.
Phylogenomic databasesHOVERGEN HBG000462; -.
Phylogenomic databasesInParanoid P00338; -.
Phylogenomic databasesKO K00016; -.
Phylogenomic databasesOMA YAPSAFV; -.
Phylogenomic databasesOrthoDB EOG7X0VH3; -.
Phylogenomic databasesPhylomeDB P00338; -.
Phylogenomic databasesTreeFam TF314963; -.
Organism-specific databasesCTD 3939; -.
Organism-specific databasesGeneCards GC11P018415; -.
Organism-specific databasesHGNC HGNC:6535; LDHA.
Organism-specific databasesHPA CAB015336; -.
Organism-specific databasesMIM 150000; gene.
Organism-specific databasesMIM 612933; phenotype.
Organism-specific databasesneXtProt NX_P00338; -.
Organism-specific databasesOrphanet 284426; Glycogen storage disease due to lactate dehydrogenase M-subunit deficiency.
Organism-specific databasesPharmGKB PA30319; -.
ChemistryBindingDB P00338; -.
ChemistryChEMBL CHEMBL4835; -.
OtherChiTaRS LDHA; human.
OtherEvolutionaryTrace P00338; -.
OtherGeneWiki LDHA; -.
OtherGenomeRNAi 3939; -.
OtherNextBio 15469; -.
OtherPRO PR:P00338; -.
Genome annotation databasesEnsembl ENST00000227157; ENSP00000227157; ENSG00000134333. [P00338-5]
Genome annotation databasesEnsembl ENST00000379412; ENSP00000368722; ENSG00000134333. [P00338-1]
Genome annotation databasesEnsembl ENST00000396222; ENSP00000379524; ENSG00000134333. [P00338-2]
Genome annotation databasesEnsembl ENST00000422447; ENSP00000395337; ENSG00000134333. [P00338-1]
Genome annotation databasesEnsembl ENST00000430553; ENSP00000406172; ENSG00000134333. [P00338-4]
Genome annotation databasesEnsembl ENST00000540430; ENSP00000445175; ENSG00000134333. [P00338-3]
Genome annotation databasesEnsembl ENST00000542179; ENSP00000445331; ENSG00000134333. [P00338-1]
Genome annotation databasesGeneID 3939; -.
Genome annotation databasesKEGG hsa:3939; -.
Genome annotation databasesUCSC uc001mok.3; human. [P00338-1]
Genome annotation databasesUCSC uc001mol.3; human. [P00338-5]
Genome annotation databasesUCSC uc009yho.2; human. [P00338-4]
Genome annotation databasesUCSC uc010rdd.2; human. [P00338-3]
Genome annotation databasesUCSC uc021qep.1; human. [P00338-2]
Sequence databasesCCDS CCDS44549.1; -. [P00338-4]
Sequence databasesCCDS CCDS53609.1; -. [P00338-3]
Sequence databasesCCDS CCDS53610.1; -. [P00338-2]
Sequence databasesCCDS CCDS53611.1; -. [P00338-5]
Sequence databasesCCDS CCDS7839.1; -. [P00338-1]
Sequence databasesEMBL X02152; CAA26088.1; -; mRNA.
Sequence databasesEMBL X03077; CAA26879.1; -; Genomic_DNA.
Sequence databasesEMBL X03078; CAA26879.1; JOINED; Genomic_DNA.
Sequence databasesEMBL X03079; CAA26879.1; JOINED; Genomic_DNA.
Sequence databasesEMBL X03080; CAA26879.1; JOINED; Genomic_DNA.
Sequence databasesEMBL X03081; CAA26879.1; JOINED; Genomic_DNA.
Sequence databasesEMBL X03082; CAA26879.1; JOINED; Genomic_DNA.
Sequence databasesEMBL X03083; CAA26879.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AY423727; AAS00490.1; -; mRNA.
Sequence databasesEMBL AK130587; BAC85389.1; -; mRNA.
Sequence databasesEMBL AK296667; BAG59264.1; -; mRNA.
Sequence databasesEMBL AK298834; BAH12879.1; -; mRNA.
Sequence databasesEMBL CR456775; CAG33056.1; -; mRNA.
Sequence databasesEMBL CR541714; CAG46515.1; -; mRNA.
Sequence databasesEMBL AK223078; BAD96798.1; -; mRNA.
Sequence databasesEMBL AC084117; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL CH471064; EAW68395.1; -; Genomic_DNA.
Sequence databasesEMBL CH471064; EAW68396.1; -; Genomic_DNA.
Sequence databasesEMBL BC067223; AAH67223.1; -; mRNA.
Sequence databasesEMBL S66853; AAB20418.1; -; Genomic_DNA.
Sequence databasesPIR A00347; DEHULM.
Sequence databasesRefSeq NP_001128711.1; NM_001135239.1. [P00338-4]
Sequence databasesRefSeq NP_001158886.1; NM_001165414.1. [P00338-3]
Sequence databasesRefSeq NP_001158887.1; NM_001165415.1. [P00338-2]
Sequence databasesRefSeq NP_001158888.1; NM_001165416.1. [P00338-5]
Sequence databasesRefSeq NP_005557.1; NM_005566.3. [P00338-1]
Sequence databasesUniGene Hs.2795; -.
Polymorphism databasesDMDM 126047; -.
Gene expression databasesBgee P00338; -.
Gene expression databasesCleanEx HS_LDHA; -.
Gene expression databasesExpressionAtlas P00338; baseline and differential.
Gene expression databasesGenevestigator P00338; -.
OntologiesGO GO:0005829; C:cytosol; TAS:Reactome.
OntologiesGO GO:0070062; C:extracellular vesicular exosome; IDA:UniProtKB.
OntologiesGO GO:0016020; C:membrane; IDA:UniProtKB.
OntologiesGO GO:0005739; C:mitochondrion; IEA:Ensembl.
OntologiesGO GO:0005634; C:nucleus; IDA:UniProt.
OntologiesGO GO:0035686; C:sperm fibrous sheath; IEA:Ensembl.
OntologiesGO GO:0004459; F:L-lactate dehydrogenase activity; NAS:UniProtKB.
OntologiesGO GO:0044262; P:cellular carbohydrate metabolic process; IEA:InterPro.
OntologiesGO GO:0044237; P:cellular metabolic process; TAS:Reactome.
OntologiesGO GO:0031668; P:cellular response to extracellular stimulus; IEA:Ensembl.
OntologiesGO GO:0006096; P:glycolytic process; NAS:UniProtKB.
OntologiesGO GO:0006090; P:pyruvate metabolic process; TAS:Reactome.
OntologiesGO GO:0044281; P:small molecule metabolic process; TAS:Reactome.
OntologiesGO GO:0021762; P:substantia nigra development; IEP:UniProtKB.
Proteomic databasesMaxQB P00338; -.
Proteomic databasesPaxDb P00338; -.
Proteomic databasesPeptideAtlas P00338; -.
Proteomic databasesPRIDE P00338; -.
Family and domain databasesGene3D 3.40.50.720; -; 1.
Family and domain databasesGene3D 3.90.110.10; -; 1.
Family and domain databasesHAMAP MF_00488; Lactate_dehydrog; 1.
Family and domain databasesInterPro IPR001557; L-lactate/malate_DH.
Family and domain databasesInterPro IPR011304; L-lactate_DH.
Family and domain databasesInterPro IPR018177; L-lactate_DH_AS.
Family and domain databasesInterPro IPR022383; Lactate/malate_DH_C.
Family and domain databasesInterPro IPR001236; Lactate/malate_DH_N.
Family and domain databasesInterPro IPR015955; Lactate_DH/Glyco_Ohase_4_C.
Family and domain databasesInterPro IPR016040; NAD(P)-bd_dom.
Family and domain databasesPANTHER PTHR11540; PTHR11540; 1.
Family and domain databasesPfam PF02866; Ldh_1_C; 1.
Family and domain databasesPfam PF00056; Ldh_1_N; 1.
Family and domain databasesPIRSF PIRSF000102; Lac_mal_DH; 1.
Family and domain databasesPRINTS PR00086; LLDHDRGNASE.
Family and domain databasesPROSITE PS00064; L_LDH; 1.
Family and domain databasesSUPFAM SSF56327; SSF56327; 1.
Family and domain databasesTIGRFAMs TIGR01771; L-LDH-NAD; 1.
PTM databasesPhosphoSite P00338; -.
Protein-protein interaction databasesBioGrid 110131; 67.
Protein-protein interaction databasesIntAct P00338; 18.
Protein-protein interaction databasesMINT MINT-4998672; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000395337; -.
Enzyme and pathway databasesReactome REACT_2071; Pyruvate metabolism.
Enzyme and pathway databasesSABIO-RK P00338; -.
Enzyme and pathway databasesUniPathway UPA00554; UER00611.
2D gel databasesDOSAC-COBS-2DPAGE P00338; -.
2D gel databasesOGP P00338; -.
2D gel databasesREPRODUCTION-2DPAGE IPI00217966; -.
3D structure databasesPDB 1I10; X-ray; 2.30 A; A/B/C/D/E/F/G/H=2-332.
3D structure databasesPDB 4AJP; X-ray; 2.38 A; A/B/C/D=2-332.
3D structure databasesPDB 4JNK; X-ray; 1.90 A; A/B/C/D=2-332.
3D structure databasesPDB 4L4R; X-ray; 2.10 A; A/H=2-332.
3D structure databasesPDB 4L4S; X-ray; 2.90 A; A/H=2-332.
3D structure databasesPDB 4M49; X-ray; 2.05 A; A/B/C/D=2-332.
3D structure databasesPDB 4QO7; X-ray; 2.14 A; A/B/C/D=2-332.
3D structure databasesPDB 4QO8; X-ray; 2.00 A; A/B/C/D=2-332.
3D structure databasesPDBsum 1I10; -.
3D structure databasesPDBsum 4AJP; -.
3D structure databasesPDBsum 4JNK; -.
3D structure databasesPDBsum 4L4R; -.
3D structure databasesPDBsum 4L4S; -.
3D structure databasesPDBsum 4M49; -.
3D structure databasesPDBsum 4QO7; -.
3D structure databasesPDBsum 4QO8; -.
3D structure databasesProteinModelPortal P00338; -.
3D structure databasesSMR P00338; 2-332.
Protocols and materials databasesDNASU 3939; -.
Phylogenomic databaseseggNOG COG0039; -.
Phylogenomic databasesGeneTree ENSGT00550000074541; -.
Phylogenomic databasesHOGENOM HOG000213793; -.
Phylogenomic databasesHOVERGEN HBG000462; -.
Phylogenomic databasesInParanoid P00338; -.
Phylogenomic databasesKO K00016; -.
Phylogenomic databasesOMA YAPSAFV; -.
Phylogenomic databasesOrthoDB EOG7X0VH3; -.
Phylogenomic databasesPhylomeDB P00338; -.
Phylogenomic databasesTreeFam TF314963; -.
Organism-specific databasesCTD 3939; -.
Organism-specific databasesGeneCards GC11P018415; -.
Organism-specific databasesHGNC HGNC:6535; LDHA.
Organism-specific databasesHPA CAB015336; -.
Organism-specific databasesMIM 150000; gene.
Organism-specific databasesMIM 612933; phenotype.
Organism-specific databasesneXtProt NX_P00338; -.
Organism-specific databasesOrphanet 284426; Glycogen storage disease due to lactate dehydrogenase M-subunit deficiency.
Organism-specific databasesPharmGKB PA30319; -.
ChemistryBindingDB P00338; -.
ChemistryChEMBL CHEMBL4835; -.
OtherChiTaRS LDHA; human.
OtherEvolutionaryTrace P00338; -.
OtherGeneWiki LDHA; -.
OtherGenomeRNAi 3939; -.
OtherNextBio 15469; -.
OtherPRO PR:P00338; -.



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