Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 4522
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000216605; ENSP00000216605; ENSG00000100714.
Genome annotation databasesEnsembl ENST00000555709; ENSP00000450560; ENSG00000100714.
Genome annotation databasesGeneID 4522; -.
Genome annotation databasesKEGG hsa:4522; -.
Sequence databasesCCDS CCDS9763.1; -.
Sequence databasesEMBL J04031; AAA59574.1; -; mRNA.
Sequence databasesEMBL AK312361; BAG35279.1; -; mRNA.
Sequence databasesEMBL AL122035; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL CH471061; EAW80857.1; -; Genomic_DNA.
Sequence databasesEMBL BC001014; AAH01014.2; -; mRNA.
Sequence databasesEMBL BC009806; AAH09806.1; -; mRNA.
Sequence databasesEMBL BC050420; AAH50420.1; -; mRNA.
Sequence databasesPIR A31903; A31903.
Sequence databasesRefSeq NP_005947.3; NM_005956.3.
Sequence databasesUniGene Hs.652308; -.
Polymorphism databasesDMDM 115206; -.
Gene expression databasesBgee P11586; -.
Gene expression databasesCleanEx HS_MTHFD1; -.
Gene expression databasesExpressionAtlas P11586; baseline and differential.
Gene expression databasesGenevestigator P11586; -.
OntologiesGO GO:0005829; C:cytosol; IBA:RefGenome.
OntologiesGO GO:0070062; C:extracellular vesicular exosome; IDA:UniProtKB.
OntologiesGO GO:0016020; C:membrane; IDA:UniProtKB.
OntologiesGO GO:0005739; C:mitochondrion; TAS:ProtInc.
OntologiesGO GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
OntologiesGO GO:0004329; F:formate-tetrahydrofolate ligase activity; IBA:RefGenome.
OntologiesGO GO:0004477; F:methenyltetrahydrofolate cyclohydrolase activity; IBA:RefGenome.
OntologiesGO GO:0004488; F:methylenetetrahydrofolate dehydrogenase (NADP+) activity; IBA:RefGenome.
OntologiesGO GO:0004486; F:methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity; TAS:Reactome.
OntologiesGO GO:0046655; P:folic acid metabolic process; TAS:Reactome.
OntologiesGO GO:0009396; P:folic acid-containing compound biosynthetic process; IEA:InterPro.
OntologiesGO GO:0000105; P:histidine biosynthetic process; IEA:UniProtKB-KW.
OntologiesGO GO:0009086; P:methionine biosynthetic process; IEA:UniProtKB-KW.
OntologiesGO GO:0006730; P:one-carbon metabolic process; IBA:RefGenome.
OntologiesGO GO:0006164; P:purine nucleotide biosynthetic process; IEA:UniProtKB-KW.
OntologiesGO GO:0044281; P:small molecule metabolic process; TAS:Reactome.
OntologiesGO GO:0035999; P:tetrahydrofolate interconversion; IEA:UniProtKB-UniPathway.
OntologiesGO GO:0006766; P:vitamin metabolic process; TAS:Reactome.
OntologiesGO GO:0006767; P:water-soluble vitamin metabolic process; TAS:Reactome.
Proteomic databasesMaxQB P11586; -.
Proteomic databasesPaxDb P11586; -.
Proteomic databasesPRIDE P11586; -.
Family and domain databasesGene3D 3.40.50.300; -; 2.
Family and domain databasesGene3D 3.40.50.720; -; 1.
Family and domain databasesHAMAP MF_01543; FTHFS; 1.
Family and domain databasesHAMAP MF_01576; THF_DHG_CYH; 1.
Family and domain databasesInterPro IPR000559; Formate_THF_ligase.
Family and domain databasesInterPro IPR020628; Formate_THF_ligase_CS.
Family and domain databasesInterPro IPR016040; NAD(P)-bd_dom.
Family and domain databasesInterPro IPR027417; P-loop_NTPase.
Family and domain databasesInterPro IPR000672; THF_DH/CycHdrlase.
Family and domain databasesInterPro IPR020630; THF_DH/CycHdrlase_cat_dom.
Family and domain databasesInterPro IPR020867; THF_DH/CycHdrlase_CS.
Family and domain databasesInterPro IPR020631; THF_DH/CycHdrlase_NAD-bd_dom.
Family and domain databasesPfam PF01268; FTHFS; 1.
Family and domain databasesPfam PF00763; THF_DHG_CYH; 1.
Family and domain databasesPfam PF02882; THF_DHG_CYH_C; 1.
Family and domain databasesPRINTS PR00085; THFDHDRGNASE.
Family and domain databasesPROSITE PS00721; FTHFS_1; 1.
Family and domain databasesPROSITE PS00722; FTHFS_2; 1.
Family and domain databasesPROSITE PS00766; THF_DHG_CYH_1; 1.
Family and domain databasesPROSITE PS00767; THF_DHG_CYH_2; 1.
Family and domain databasesSUPFAM SSF52540; SSF52540; 2.
PTM databasesPhosphoSite P11586; -.
Protein-protein interaction databasesBioGrid 110622; 52.
Protein-protein interaction databasesIntAct P11586; 7.
Protein-protein interaction databasesMINT MINT-5000922; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000216605; -.
Enzyme and pathway databasesBioCyc MetaCyc:HS02138-MONOMER; -.
Enzyme and pathway databasesBRENDA 6.3.4.3; 2681.
Enzyme and pathway databasesReactome REACT_11167; Metabolism of folate and pterines.
Enzyme and pathway databasesUniPathway UPA00193; -.
2D gel databasesREPRODUCTION-2DPAGE IPI00218342; -.
2D gel databasesSWISS-2DPAGE P11586; -.
3D structure databasesPDB 1A4I; X-ray; 1.50 A; A/B=1-301.
3D structure databasesPDB 1DIA; X-ray; 2.20 A; A/B=1-306.
3D structure databasesPDB 1DIB; X-ray; 2.70 A; A/B=1-306.
3D structure databasesPDB 1DIG; X-ray; 2.20 A; A/B=1-306.
3D structure databasesPDBsum 1A4I; -.
3D structure databasesPDBsum 1DIA; -.
3D structure databasesPDBsum 1DIB; -.
3D structure databasesPDBsum 1DIG; -.
3D structure databasesProteinModelPortal P11586; -.
3D structure databasesSMR P11586; 2-296, 318-927.
Protocols and materials databasesDNASU 4522; -.
Phylogenomic databaseseggNOG COG0190; -.
Phylogenomic databasesHOVERGEN HBG004916; -.
Phylogenomic databasesInParanoid P11586; -.
Phylogenomic databasesKO K00288; -.
Phylogenomic databasesPhylomeDB P11586; -.
Phylogenomic databasesTreeFam TF300623; -.
Organism-specific databasesCTD 4522; -.
Organism-specific databasesGeneCards GC14P064854; -.
Organism-specific databasesH-InvDB HIX0011731; -.
Organism-specific databasesHGNC HGNC:7432; MTHFD1.
Organism-specific databasesHPA HPA000704; -.
Organism-specific databasesHPA HPA001290; -.
Organism-specific databasesHPA HPA015006; -.
Organism-specific databasesMIM 114500; phenotype.
Organism-specific databasesMIM 172460; gene+phenotype.
Organism-specific databasesMIM 601634; phenotype.
Organism-specific databasesneXtProt NX_P11586; -.
Organism-specific databasesOrphanet 268392; Cervical spina bifida aperta.
Organism-specific databasesOrphanet 268762; Cervical spina bifida cystica.
Organism-specific databasesOrphanet 268397; Cervicothoracic spina bifida aperta.
Organism-specific databasesOrphanet 268766; Cervicothoracic spina bifida cystica.
Organism-specific databasesOrphanet 268388; Lumbosacral spina bifida aperta.
Organism-specific databasesOrphanet 268758; Lumbosacral spina bifida cystica.
Organism-specific databasesOrphanet 268384; Thoracolumbosacral spina bifida aperta.
Organism-specific databasesOrphanet 268752; Thoracolumbosacral spina bifida cystica.
Organism-specific databasesOrphanet 268377; Total spina bifida aperta.
Organism-specific databasesOrphanet 268748; Total spina bifida cystica.
Organism-specific databasesOrphanet 268740; Upper thoracic spina bifida aperta.
Organism-specific databasesOrphanet 268770; Upper thoracic spina bifida cystica.
Organism-specific databasesPharmGKB PA31236; -.
ChemistryBindingDB P11586; -.
ChemistryChEMBL CHEMBL2541; -.
ChemistryDrugBank DB00116; Tetrahydrofolic acid.
OtherChiTaRS MTHFD1; human.
OtherEvolutionaryTrace P11586; -.
OtherGeneWiki MTHFD1; -.
OtherGenomeRNAi 4522; -.
OtherNextBio 17468; -.
OtherPRO PR:P11586; -.



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