Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 25885
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000263857; ENSP00000263857; ENSG00000068654.
Genome annotation databasesGeneID 25885; -.
Genome annotation databasesKEGG hsa:25885; -.
Genome annotation databasesUCSC uc002sqs.3; human.
Sequence databasesCCDS CCDS42706.1; -.
Sequence databasesEMBL U33460; AAC99959.1; ALT_FRAME; mRNA.
Sequence databasesEMBL AH007280; AAD09356.1; ALT_FRAME; Transcribed_RNA.
Sequence databasesEMBL AK302458; BAH13716.1; -; mRNA.
Sequence databasesEMBL CH471053; EAW99467.1; -; Genomic_DNA.
Sequence databasesEMBL CH471053; EAW99469.1; -; Genomic_DNA.
Sequence databasesEMBL BC117173; AAI17174.1; -; mRNA.
Sequence databasesEMBL BC126303; AAI26304.1; -; mRNA.
Sequence databasesEMBL AL117467; CAB55942.1; -; mRNA.
Sequence databasesPIR T17252; T17252.
Sequence databasesRefSeq NP_056240.2; NM_015425.3.
Sequence databasesUniGene Hs.531818; -.
Gene expression databasesBgee O95602; -.
Gene expression databasesCleanEx HS_POLR1A; -.
Gene expression databasesExpressionAtlas O95602; baseline and differential.
Gene expression databasesGenevestigator O95602; -.
OntologiesGO GO:0005737; C:cytoplasm; IDA:HPA.
OntologiesGO GO:0005736; C:DNA-directed RNA polymerase I complex; IEA:Ensembl.
OntologiesGO GO:0005730; C:nucleolus; IDA:HPA.
OntologiesGO GO:0005654; C:nucleoplasm; TAS:Reactome.
OntologiesGO GO:0005634; C:nucleus; IDA:HPA.
OntologiesGO GO:0003677; F:DNA binding; IEA:InterPro.
OntologiesGO GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
OntologiesGO GO:0008270; F:zinc ion binding; IEA:InterPro.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0006363; P:termination of RNA polymerase I transcription; TAS:Reactome.
OntologiesGO GO:0006362; P:transcription elongation from RNA polymerase I promoter; TAS:Reactome.
OntologiesGO GO:0006360; P:transcription from RNA polymerase I promoter; TAS:Reactome.
OntologiesGO GO:0006361; P:transcription initiation from RNA polymerase I promoter; TAS:Reactome.
Proteomic databasesMaxQB O95602; -.
Proteomic databasesPaxDb O95602; -.
Proteomic databasesPRIDE O95602; -.
Family and domain databasesInterPro IPR015699; DNA-dir_RNA_pol1_lsu.
Family and domain databasesInterPro IPR000722; RNA_pol_asu.
Family and domain databasesInterPro IPR006592; RNA_pol_N.
Family and domain databasesInterPro IPR007080; RNA_pol_Rpb1_1.
Family and domain databasesInterPro IPR007066; RNA_pol_Rpb1_3.
Family and domain databasesInterPro IPR007083; RNA_pol_Rpb1_4.
Family and domain databasesInterPro IPR007081; RNA_pol_Rpb1_5.
Family and domain databasesPANTHER PTHR19376:SF11; PTHR19376:SF11; 1.
Family and domain databasesPfam PF04997; RNA_pol_Rpb1_1; 1.
Family and domain databasesPfam PF00623; RNA_pol_Rpb1_2; 1.
Family and domain databasesPfam PF04983; RNA_pol_Rpb1_3; 1.
Family and domain databasesPfam PF05000; RNA_pol_Rpb1_4; 1.
Family and domain databasesPfam PF04998; RNA_pol_Rpb1_5; 1.
Family and domain databasesSMART SM00663; RPOLA_N; 1.
PTM databasesPhosphoSite O95602; -.
Protein-protein interaction databasesBioGrid 117396; 40.
Protein-protein interaction databasesDIP DIP-27537N; -.
Protein-protein interaction databasesIntAct O95602; 23.
Protein-protein interaction databasesMINT MINT-111492; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000263857; -.
Enzyme and pathway databasesReactome REACT_1074; RNA Polymerase I Transcription Termination.
Enzyme and pathway databasesReactome REACT_1913; RNA Polymerase I Promoter Escape.
Enzyme and pathway databasesReactome REACT_200856; NoRC negatively regulates rRNA expression.
Enzyme and pathway databasesReactome REACT_2204; RNA Polymerase I Chain Elongation.
Enzyme and pathway databasesReactome REACT_953; RNA Polymerase I Transcription Initiation.
2D gel databasesSWISS-2DPAGE O95602; -.
3D structure databasesProteinModelPortal O95602; -.
3D structure databasesSMR O95602; 6-110, 253-1025, 1189-1282, 1501-1715.
Phylogenomic databaseseggNOG COG0086; -.
Phylogenomic databasesGeneTree ENSGT00550000074861; -.
Phylogenomic databasesHOGENOM HOG000205401; -.
Phylogenomic databasesHOVERGEN HBG017741; -.
Phylogenomic databasesInParanoid O95602; -.
Phylogenomic databasesKO K02999; -.
Phylogenomic databasesOMA CLLNETT; -.
Phylogenomic databasesPhylomeDB O95602; -.
Phylogenomic databasesTreeFam TF103033; -.
Organism-specific databasesCTD 25885; -.
Organism-specific databasesGeneCards GC02M086249; -.
Organism-specific databasesH-InvDB HIX0002233; -.
Organism-specific databasesHGNC HGNC:17264; POLR1A.
Organism-specific databasesHPA CAB010145; -.
Organism-specific databasesHPA HPA031513; -.
Organism-specific databasesHPA HPA049700; -.
Organism-specific databasesneXtProt NX_O95602; -.
Organism-specific databasesPharmGKB PA134891380; -.
OtherChiTaRS POLR1A; human.
OtherGeneWiki POLR1A; -.
OtherGenomeRNAi 25885; -.
OtherNextBio 47304; -.
OtherPMAP-CutDB O95602; -.
OtherPRO PR:O95602; -.



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