Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 5437
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000429568; ENSP00000415536; ENSG00000163882. [P52434-4]
Genome annotation databasesEnsembl ENST00000430783; ENSP00000411883; ENSG00000163882. [P52434-2]
Genome annotation databasesEnsembl ENST00000438240; ENSP00000398622; ENSG00000163882. [P52434-3]
Genome annotation databasesEnsembl ENST00000443489; ENSP00000393773; ENSG00000163882. [P52434-5]
Genome annotation databasesEnsembl ENST00000452961; ENSP00000399882; ENSG00000163882. [P52434-3]
Genome annotation databasesEnsembl ENST00000456318; ENSP00000392913; ENSG00000163882. [P52434-1]
Genome annotation databasesGeneID 5437; -.
Genome annotation databasesKEGG hsa:5437; -.
Genome annotation databasesUCSC uc003fok.2; human. [P52434-1]
Sequence databasesCCDS CCDS3264.1; -. [P52434-1]
Sequence databasesCCDS CCDS63859.1; -. [P52434-4]
Sequence databasesCCDS CCDS63860.1; -. [P52434-2]
Sequence databasesCCDS CCDS63861.1; -. [P52434-3]
Sequence databasesCCDS CCDS63862.1; -. [P52434-5]
Sequence databasesEMBL U37689; AAA91458.1; -; mRNA.
Sequence databasesEMBL Z49199; CAA89060.1; -; mRNA.
Sequence databasesEMBL AJ252079; CAB92189.1; -; Genomic_DNA.
Sequence databasesEMBL AJ252080; CAB92189.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AC078797; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL BC000739; AAH00739.1; -; mRNA.
Sequence databasesPIR S55370; S55370.
Sequence databasesRefSeq NP_001265627.1; NM_001278698.1. [P52434-4]
Sequence databasesRefSeq NP_001265628.1; NM_001278699.1. [P52434-3]
Sequence databasesRefSeq NP_001265629.1; NM_001278700.1. [P52434-3]
Sequence databasesRefSeq NP_001265643.1; NM_001278714.1. [P52434-2]
Sequence databasesRefSeq NP_001265644.1; NM_001278715.1. [P52434-5]
Sequence databasesRefSeq NP_006223.2; NM_006232.3. [P52434-1]
Sequence databasesRefSeq XP_005247598.1; XM_005247541.1. [P52434-4]
Sequence databasesRefSeq XP_006713729.1; XM_006713666.1. [P52434-4]
Sequence databasesRefSeq XP_006713730.1; XM_006713667.1. [P52434-4]
Sequence databasesRefSeq XP_006713731.1; XM_006713668.1. [P52434-1]
Sequence databasesRefSeq XP_006713733.1; XM_006713670.1. [P52434-3]
Sequence databasesUniGene Hs.432574; -.
Polymorphism databasesDMDM 20178325; -.
Gene expression databasesBgee P52434; -.
Gene expression databasesCleanEx HS_POLR2H; -.
Gene expression databasesExpressionAtlas P52434; baseline and differential.
Gene expression databasesGenevestigator P52434; -.
OntologiesGO GO:0005829; C:cytosol; TAS:Reactome.
OntologiesGO GO:0005736; C:DNA-directed RNA polymerase I complex; IBA:RefGenome.
OntologiesGO GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:UniProtKB.
OntologiesGO GO:0005666; C:DNA-directed RNA polymerase III complex; IBA:RefGenome.
OntologiesGO GO:0005654; C:nucleoplasm; TAS:Reactome.
OntologiesGO GO:0005634; C:nucleus; IDA:UniProtKB.
OntologiesGO GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
OntologiesGO GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
OntologiesGO GO:0006370; P:7-methylguanosine mRNA capping; TAS:Reactome.
OntologiesGO GO:0006281; P:DNA repair; TAS:Reactome.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0045087; P:innate immune response; TAS:Reactome.
OntologiesGO GO:0000398; P:mRNA splicing, via spliceosome; TAS:Reactome.
OntologiesGO GO:0006289; P:nucleotide-excision repair; TAS:Reactome.
OntologiesGO GO:0032481; P:positive regulation of type I interferon production; TAS:Reactome.
OntologiesGO GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.
OntologiesGO GO:0008380; P:RNA splicing; TAS:Reactome.
OntologiesGO GO:0006363; P:termination of RNA polymerase I transcription; TAS:Reactome.
OntologiesGO GO:0006386; P:termination of RNA polymerase III transcription; TAS:Reactome.
OntologiesGO GO:0006362; P:transcription elongation from RNA polymerase I promoter; TAS:Reactome.
OntologiesGO GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.
OntologiesGO GO:0006385; P:transcription elongation from RNA polymerase III promoter; TAS:Reactome.
OntologiesGO GO:0006360; P:transcription from RNA polymerase I promoter; TAS:Reactome.
OntologiesGO GO:0006366; P:transcription from RNA polymerase II promoter; IDA:UniProtKB.
OntologiesGO GO:0006383; P:transcription from RNA polymerase III promoter; TAS:Reactome.
OntologiesGO GO:0006361; P:transcription initiation from RNA polymerase I promoter; TAS:Reactome.
OntologiesGO GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.
OntologiesGO GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.
OntologiesGO GO:0016032; P:viral process; TAS:Reactome.
Proteomic databasesMaxQB P52434; -.
Proteomic databasesPaxDb P52434; -.
Proteomic databasesPeptideAtlas P52434; -.
Proteomic databasesPRIDE P52434; -.
Family and domain databasesGene3D 2.40.50.140; -; 1.
Family and domain databasesInterPro IPR012340; NA-bd_OB-fold.
Family and domain databasesInterPro IPR005570; RNA_pol_Rpb8.
Family and domain databasesPANTHER PTHR10917; PTHR10917; 1.
Family and domain databasesPfam PF03870; RNA_pol_Rpb8; 1.
Family and domain databasesPIRSF PIRSF000779; RNA_pol_Rpb8; 1.
Family and domain databasesSMART SM00658; RPOL8c; 1.
Family and domain databasesSUPFAM SSF50249; SSF50249; 1.
PTM databasesPhosphoSite P52434; -.
Protein-protein interaction databasesBioGrid 111433; 47.
Protein-protein interaction databasesDIP DIP-27556N; -.
Protein-protein interaction databasesIntAct P52434; 9.
Protein-protein interaction databasesMINT MINT-1162805; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000296223; -.
Enzyme and pathway databasesReactome REACT_1036; RNA Polymerase III Transcription Initiation From Type 2 Promoter.
Enzyme and pathway databasesReactome REACT_1074; RNA Polymerase I Transcription Termination.
Enzyme and pathway databasesReactome REACT_12417; MicroRNA (miRNA) biogenesis.
Enzyme and pathway databasesReactome REACT_125; Processing of Capped Intron-Containing Pre-mRNA.
Enzyme and pathway databasesReactome REACT_1470; mRNA Capping.
Enzyme and pathway databasesReactome REACT_1628; Transcription-coupled NER (TC-NER).
Enzyme and pathway databasesReactome REACT_1655; RNA Polymerase II Transcription Pre-Initiation And Promoter Opening.
Enzyme and pathway databasesReactome REACT_1753; mRNA Splicing - Minor Pathway.
Enzyme and pathway databasesReactome REACT_1851; RNA Polymerase II Transcription Initiation.
Enzyme and pathway databasesReactome REACT_1913; RNA Polymerase I Promoter Escape.
Enzyme and pathway databasesReactome REACT_1941; Formation of transcription-coupled NER (TC-NER) repair complex.
Enzyme and pathway databasesReactome REACT_200856; NoRC negatively regulates rRNA expression.
Enzyme and pathway databasesReactome REACT_2089; RNA Polymerase II Promoter Escape.
Enzyme and pathway databasesReactome REACT_2204; RNA Polymerase I Chain Elongation.
Enzyme and pathway databasesReactome REACT_22107; RNA Polymerase II Pre-transcription Events.
Enzyme and pathway databasesReactome REACT_22201; Formation of HIV elongation complex in the absence of HIV Tat.
Enzyme and pathway databasesReactome REACT_2222; Dual incision reaction in TC-NER.
Enzyme and pathway databasesReactome REACT_22339; RNA Polymerase III Abortive And Retractive Initiation.
Enzyme and pathway databasesReactome REACT_267668; Transcriptional regulation by small RNAs.
Enzyme and pathway databasesReactome REACT_347; RNA Polymerase III Transcription Initiation From Type 1 Promoter.
Enzyme and pathway databasesReactome REACT_467; mRNA Splicing - Major Pathway.
Enzyme and pathway databasesReactome REACT_571; RNA Polymerase III Transcription Initiation From Type 3 Promoter.
Enzyme and pathway databasesReactome REACT_6143; Pausing and recovery of Tat-mediated HIV elongation.
Enzyme and pathway databasesReactome REACT_6162; Tat-mediated elongation of the HIV-1 transcript.
Enzyme and pathway databasesReactome REACT_6233; Transcription of the HIV genome.
Enzyme and pathway databasesReactome REACT_6237; RNA Pol II CTD phosphorylation and interaction with CE.
Enzyme and pathway databasesReactome REACT_6244; Pausing and recovery of HIV elongation.
Enzyme and pathway databasesReactome REACT_6253; RNA Polymerase II HIV Promoter Escape.
Enzyme and pathway databasesReactome REACT_6259; HIV elongation arrest and recovery.
Enzyme and pathway databasesReactome REACT_6261; Abortive elongation of HIV-1 transcript in the absence of Tat.
Enzyme and pathway databasesReactome REACT_63; RNA Polymerase III Transcription Termination.
Enzyme and pathway databasesReactome REACT_6319; Formation of the HIV-1 Early Elongation Complex.
Enzyme and pathway databasesReactome REACT_6332; HIV Transcription Initiation.
Enzyme and pathway databasesReactome REACT_6344; Tat-mediated HIV elongation arrest and recovery.
Enzyme and pathway databasesReactome REACT_6346; Formation of HIV-1 elongation complex containing HIV-1 Tat.
Enzyme and pathway databasesReactome REACT_6354; Viral Messenger RNA Synthesis.
Enzyme and pathway databasesReactome REACT_756; RNA Polymerase III Chain Elongation.
Enzyme and pathway databasesReactome REACT_833; RNA Polymerase II Transcription Elongation.
Enzyme and pathway databasesReactome REACT_834; RNA Polymerase II Transcription Initiation And Promoter Clearance.
Enzyme and pathway databasesReactome REACT_846; Formation of the Early Elongation Complex.
Enzyme and pathway databasesReactome REACT_953; RNA Polymerase I Transcription Initiation.
Enzyme and pathway databasesReactome REACT_975; RNA Pol II CTD phosphorylation and interaction with CE.
3D structure databasesDisProt DP00504; -.
3D structure databasesPDB 2F3I; NMR; -; A=1-150.
3D structure databasesPDBsum 2F3I; -.
3D structure databasesProteinModelPortal P52434; -.
3D structure databasesSMR P52434; 1-150.
Protocols and materials databasesDNASU 5437; -.
Phylogenomic databaseseggNOG NOG279425; -.
Phylogenomic databasesGeneTree ENSGT00390000018195; -.
Phylogenomic databasesHOGENOM HOG000175572; -.
Phylogenomic databasesHOVERGEN HBG036116; -.
Phylogenomic databasesInParanoid P52434; -.
Phylogenomic databasesKO K03016; -.
Phylogenomic databasesOMA EIAHARP; -.
Phylogenomic databasesOrthoDB EOG7SN8DR; -.
Phylogenomic databasesPhylomeDB P52434; -.
Phylogenomic databasesTreeFam TF103043; -.
Organism-specific databasesCTD 5437; -.
Organism-specific databasesGeneCards GC03P184079; -.
Organism-specific databasesHGNC HGNC:9195; POLR2H.
Organism-specific databasesHPA HPA037745; -.
Organism-specific databasesMIM 606023; gene.
Organism-specific databasesneXtProt NX_P52434; -.
Organism-specific databasesPharmGKB PA33515; -.
OtherChiTaRS POLR2H; human.
OtherEvolutionaryTrace P52434; -.
OtherGeneWiki POLR2H; -.
OtherGenomeRNAi 5437; -.
OtherNextBio 21037; -.
OtherPRO PR:P52434; -.



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