Cancer Cell Metabolism Gene Database

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 5707
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000308696; ENSP00000309474; ENSG00000173692. [Q99460-1]
Genome annotation databasesEnsembl ENST00000373635; ENSP00000362738; ENSG00000173692. [Q99460-2]
Genome annotation databasesEnsembl ENST00000409643; ENSP00000386932; ENSG00000173692. [Q99460-2]
Genome annotation databasesGeneID 5707; -.
Genome annotation databasesKEGG hsa:5707; -.
Genome annotation databasesUCSC uc002vrm.2; human. [Q99460-2]
Genome annotation databasesUCSC uc002vrn.2; human. [Q99460-1]
Sequence databasesCCDS CCDS2482.1; -. [Q99460-1]
Sequence databasesCCDS CCDS54436.1; -. [Q99460-2]
Sequence databasesEMBL D44466; BAA07918.1; -; mRNA.
Sequence databasesEMBL AC009407; AAX93127.1; -; Genomic_DNA.
Sequence databasesEMBL BC001053; AAH01053.1; ALT_SEQ; mRNA.
Sequence databasesEMBL BC014013; AAH14013.1; ALT_SEQ; mRNA.
Sequence databasesEMBL BC039845; AAH39845.1; ALT_SEQ; mRNA.
Sequence databasesEMBL BC047897; AAH47897.1; ALT_SEQ; mRNA.
Sequence databasesEMBL BC064398; AAH64398.1; ALT_SEQ; mRNA.
Sequence databasesEMBL BC073833; AAH73833.1; ALT_SEQ; mRNA.
Sequence databasesEMBL BC094720; AAH94720.1; -; mRNA.
Sequence databasesEMBL BC112344; AAI12345.1; -; mRNA.
Sequence databasesEMBL BC114434; AAI14435.1; -; mRNA.
Sequence databasesRefSeq NP_001177966.1; NM_001191037.1. [Q99460-2]
Sequence databasesRefSeq NP_002798.2; NM_002807.3. [Q99460-1]
Sequence databasesUniGene Hs.3887; -.
Polymorphism databasesDMDM 51704332; -.
Gene expression databasesBgee Q99460; -.
Gene expression databasesCleanEx HS_PSMD1; -.
Gene expression databasesExpressionAtlas Q99460; baseline and differential.
Gene expression databasesGenevestigator Q99460; -.
OntologiesGO GO:0005829; C:cytosol; TAS:Reactome.
OntologiesGO GO:0070062; C:extracellular vesicular exosome; IDA:UniProt.
OntologiesGO GO:0016020; C:membrane; IDA:UniProtKB.
OntologiesGO GO:0005654; C:nucleoplasm; TAS:Reactome.
OntologiesGO GO:0022624; C:proteasome accessory complex; ISS:UniProtKB.
OntologiesGO GO:0000502; C:proteasome complex; IDA:UniProtKB.
OntologiesGO GO:0005838; C:proteasome regulatory particle; TAS:ProtInc.
OntologiesGO GO:0030234; F:enzyme regulator activity; IEA:InterPro.
OntologiesGO GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; TAS:Reactome.
OntologiesGO GO:0042590; P:antigen processing and presentation of exogenous peptide antigen via MHC class I; TAS:Reactome.
OntologiesGO GO:0002479; P:antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent; TAS:Reactome.
OntologiesGO GO:0002474; P:antigen processing and presentation of peptide antigen via MHC class I; TAS:Reactome.
OntologiesGO GO:0006915; P:apoptotic process; TAS:Reactome.
OntologiesGO GO:0034641; P:cellular nitrogen compound metabolic process; TAS:Reactome.
OntologiesGO GO:0006977; P:DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest; TAS:Reactome.
OntologiesGO GO:0000082; P:G1/S transition of mitotic cell cycle; TAS:Reactome.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0000278; P:mitotic cell cycle; TAS:Reactome.
OntologiesGO GO:0016071; P:mRNA metabolic process; TAS:Reactome.
OntologiesGO GO:0043066; P:negative regulation of apoptotic process; TAS:Reactome.
OntologiesGO GO:0051436; P:negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.
OntologiesGO GO:0051437; P:positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.
OntologiesGO GO:0000209; P:protein polyubiquitination; TAS:Reactome.
OntologiesGO GO:0042981; P:regulation of apoptotic process; TAS:Reactome.
OntologiesGO GO:0006521; P:regulation of cellular amino acid metabolic process; TAS:Reactome.
OntologiesGO GO:0042176; P:regulation of protein catabolic process; IEA:InterPro.
OntologiesGO GO:0051439; P:regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.
OntologiesGO GO:0016070; P:RNA metabolic process; TAS:Reactome.
OntologiesGO GO:0044281; P:small molecule metabolic process; TAS:Reactome.
OntologiesGO GO:0016032; P:viral process; TAS:Reactome.
Proteomic databasesMaxQB Q99460; -.
Proteomic databasesPaxDb Q99460; -.
Proteomic databasesPRIDE Q99460; -.
Family and domain databasesGene3D 1.25.10.10; -; 2.
Family and domain databasesInterPro IPR016642; 26S_Psome_Rpn2.
Family and domain databasesInterPro IPR011989; ARM-like.
Family and domain databasesInterPro IPR016024; ARM-type_fold.
Family and domain databasesInterPro IPR002015; Proteasome/cyclosome_rpt.
Family and domain databasesPfam PF01851; PC_rep; 4.
Family and domain databasesPIRSF PIRSF015947; 26S_Psome_Rpn2; 1.
Family and domain databasesSUPFAM SSF48371; SSF48371; 3.
PTM databasesPhosphoSite Q99460; -.
Protein-protein interaction databasesBioGrid 111680; 98.
Protein-protein interaction databasesDIP DIP-27548N; -.
Protein-protein interaction databasesIntAct Q99460; 35.
Protein-protein interaction databasesMINT MINT-1160606; -.
Enzyme and pathway databasesReactome REACT_11063; Degradation of beta-catenin by the destruction complex.
Enzyme and pathway databasesReactome REACT_111056; Cross-presentation of soluble exogenous antigens (endosomes).
Enzyme and pathway databasesReactome REACT_111178; ER-Phagosome pathway.
Enzyme and pathway databasesReactome REACT_1156; Orc1 removal from chromatin.
Enzyme and pathway databasesReactome REACT_118656; Activation of NF-kappaB in B cells.
Enzyme and pathway databasesReactome REACT_1221; CDK-mediated phosphorylation and removal of Cdc6.
Enzyme and pathway databasesReactome REACT_13464; Regulation of activated PAK-2p34 by proteasome mediated degradation.
Enzyme and pathway databasesReactome REACT_13565; Regulation of ornithine decarboxylase (ODC).
Enzyme and pathway databasesReactome REACT_150471; Separation of Sister Chromatids.
Enzyme and pathway databasesReactome REACT_1614; Ubiquitin Mediated Degradation of Phosphorylated Cdc25A.
Enzyme and pathway databasesReactome REACT_172638; Asymmetric localization of PCP proteins.
Enzyme and pathway databasesReactome REACT_1949; CDT1 association with the CDC6:ORC:origin complex.
Enzyme and pathway databasesReactome REACT_200766; degradation of AXIN.
Enzyme and pathway databasesReactome REACT_200841; degradation of DVL.
Enzyme and pathway databasesReactome REACT_20549; Autodegradation of the E3 ubiquitin ligase COP1.
Enzyme and pathway databasesReactome REACT_206597; Degradation of GLI2 by the proteasome.
Enzyme and pathway databasesReactome REACT_228111; Hedgehog ligand biogenesis.
Enzyme and pathway databasesReactome REACT_228209; Hh ligand biogenesis disease.
Enzyme and pathway databasesReactome REACT_231645; GLI3 is processed to GLI3R by the proteasome.
Enzyme and pathway databasesReactome REACT_25325; AUF1 (hnRNP D0) destabilizes mRNA.
Enzyme and pathway databasesReactome REACT_267605; Degradation of GLI1 by the proteasome.
Enzyme and pathway databasesReactome REACT_4; Ubiquitin-dependent degradation of Cyclin D1.
Enzyme and pathway databasesReactome REACT_6761; APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1.
Enzyme and pathway databasesReactome REACT_6785; Autodegradation of Cdh1 by Cdh1:APC/C.
Enzyme and pathway databasesReactome REACT_6821; SCF-beta-TrCP mediated degradation of Emi1.
Enzyme and pathway databasesReactome REACT_6871; APC/C:Cdc20 mediated degradation of Securin.
Enzyme and pathway databasesReactome REACT_75842; Antigen processing: Ubiquitination & Proteasome degradation.
Enzyme and pathway databasesReactome REACT_9003; SCF(Skp2)-mediated degradation of p27/p21.
Enzyme and pathway databasesReactome REACT_9031; Vpu mediated degradation of CD4.
Enzyme and pathway databasesReactome REACT_9453; Vif-mediated degradation of APOBEC3G.
3D structure databasesProteinModelPortal Q99460; -.
3D structure databasesSMR Q99460; 3-814.
Phylogenomic databaseseggNOG COG5116; -.
Phylogenomic databasesGeneTree ENSGT00550000074915; -.
Phylogenomic databasesHOVERGEN HBG007543; -.
Phylogenomic databasesInParanoid Q99460; -.
Phylogenomic databasesKO K03032; -.
Phylogenomic databasesOMA TESCRYQ; -.
Phylogenomic databasesOrthoDB EOG790G01; -.
Phylogenomic databasesPhylomeDB Q99460; -.
Phylogenomic databasesTreeFam TF105742; -.
Organism-specific databasesCTD 5707; -.
Organism-specific databasesGeneCards GC02P231921; -.
Organism-specific databasesHGNC HGNC:9554; PSMD1.
Organism-specific databasesHPA CAB021092; -.
Organism-specific databasesHPA HPA036736; -.
Organism-specific databasesneXtProt NX_Q99460; -.
Organism-specific databasesPharmGKB PA33899; -.
ChemistryDrugBank DB00188; Bortezomib.
OtherChiTaRS PSMD1; human.
OtherGeneWiki PSMD1; -.
OtherGenomeRNAi 5707; -.
OtherNextBio 22174; -.
OtherPRO PR:Q99460; -.
Genome annotation databasesEnsembl ENST00000308696; ENSP00000309474; ENSG00000173692. [Q99460-1]
Genome annotation databasesEnsembl ENST00000373635; ENSP00000362738; ENSG00000173692. [Q99460-2]
Genome annotation databasesEnsembl ENST00000409643; ENSP00000386932; ENSG00000173692. [Q99460-2]
Genome annotation databasesGeneID 5707; -.
Genome annotation databasesKEGG hsa:5707; -.
Genome annotation databasesUCSC uc002vrm.2; human. [Q99460-2]
Genome annotation databasesUCSC uc002vrn.2; human. [Q99460-1]
Sequence databasesCCDS CCDS2482.1; -. [Q99460-1]
Sequence databasesCCDS CCDS54436.1; -. [Q99460-2]
Sequence databasesEMBL D44466; BAA07918.1; -; mRNA.
Sequence databasesEMBL AC009407; AAX93127.1; -; Genomic_DNA.
Sequence databasesEMBL BC001053; AAH01053.1; ALT_SEQ; mRNA.
Sequence databasesEMBL BC014013; AAH14013.1; ALT_SEQ; mRNA.
Sequence databasesEMBL BC039845; AAH39845.1; ALT_SEQ; mRNA.
Sequence databasesEMBL BC047897; AAH47897.1; ALT_SEQ; mRNA.
Sequence databasesEMBL BC064398; AAH64398.1; ALT_SEQ; mRNA.
Sequence databasesEMBL BC073833; AAH73833.1; ALT_SEQ; mRNA.
Sequence databasesEMBL BC094720; AAH94720.1; -; mRNA.
Sequence databasesEMBL BC112344; AAI12345.1; -; mRNA.
Sequence databasesEMBL BC114434; AAI14435.1; -; mRNA.
Sequence databasesRefSeq NP_001177966.1; NM_001191037.1. [Q99460-2]
Sequence databasesRefSeq NP_002798.2; NM_002807.3. [Q99460-1]
Sequence databasesUniGene Hs.3887; -.
Polymorphism databasesDMDM 51704332; -.
Gene expression databasesBgee Q99460; -.
Gene expression databasesCleanEx HS_PSMD1; -.
Gene expression databasesExpressionAtlas Q99460; baseline and differential.
Gene expression databasesGenevestigator Q99460; -.
OntologiesGO GO:0005829; C:cytosol; TAS:Reactome.
OntologiesGO GO:0070062; C:extracellular vesicular exosome; IDA:UniProt.
OntologiesGO GO:0016020; C:membrane; IDA:UniProtKB.
OntologiesGO GO:0005654; C:nucleoplasm; TAS:Reactome.
OntologiesGO GO:0022624; C:proteasome accessory complex; ISS:UniProtKB.
OntologiesGO GO:0000502; C:proteasome complex; IDA:UniProtKB.
OntologiesGO GO:0005838; C:proteasome regulatory particle; TAS:ProtInc.
OntologiesGO GO:0030234; F:enzyme regulator activity; IEA:InterPro.
OntologiesGO GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; TAS:Reactome.
OntologiesGO GO:0042590; P:antigen processing and presentation of exogenous peptide antigen via MHC class I; TAS:Reactome.
OntologiesGO GO:0002479; P:antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent; TAS:Reactome.
OntologiesGO GO:0002474; P:antigen processing and presentation of peptide antigen via MHC class I; TAS:Reactome.
OntologiesGO GO:0006915; P:apoptotic process; TAS:Reactome.
OntologiesGO GO:0034641; P:cellular nitrogen compound metabolic process; TAS:Reactome.
OntologiesGO GO:0006977; P:DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest; TAS:Reactome.
OntologiesGO GO:0000082; P:G1/S transition of mitotic cell cycle; TAS:Reactome.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0000278; P:mitotic cell cycle; TAS:Reactome.
OntologiesGO GO:0016071; P:mRNA metabolic process; TAS:Reactome.
OntologiesGO GO:0043066; P:negative regulation of apoptotic process; TAS:Reactome.
OntologiesGO GO:0051436; P:negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.
OntologiesGO GO:0051437; P:positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.
OntologiesGO GO:0000209; P:protein polyubiquitination; TAS:Reactome.
OntologiesGO GO:0042981; P:regulation of apoptotic process; TAS:Reactome.
OntologiesGO GO:0006521; P:regulation of cellular amino acid metabolic process; TAS:Reactome.
OntologiesGO GO:0042176; P:regulation of protein catabolic process; IEA:InterPro.
OntologiesGO GO:0051439; P:regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.
OntologiesGO GO:0016070; P:RNA metabolic process; TAS:Reactome.
OntologiesGO GO:0044281; P:small molecule metabolic process; TAS:Reactome.
OntologiesGO GO:0016032; P:viral process; TAS:Reactome.
Proteomic databasesMaxQB Q99460; -.
Proteomic databasesPaxDb Q99460; -.
Proteomic databasesPRIDE Q99460; -.
Family and domain databasesGene3D 1.25.10.10; -; 2.
Family and domain databasesInterPro IPR016642; 26S_Psome_Rpn2.
Family and domain databasesInterPro IPR011989; ARM-like.
Family and domain databasesInterPro IPR016024; ARM-type_fold.
Family and domain databasesInterPro IPR002015; Proteasome/cyclosome_rpt.
Family and domain databasesPfam PF01851; PC_rep; 4.
Family and domain databasesPIRSF PIRSF015947; 26S_Psome_Rpn2; 1.
Family and domain databasesSUPFAM SSF48371; SSF48371; 3.
PTM databasesPhosphoSite Q99460; -.
Protein-protein interaction databasesBioGrid 111680; 98.
Protein-protein interaction databasesDIP DIP-27548N; -.
Protein-protein interaction databasesIntAct Q99460; 35.
Protein-protein interaction databasesMINT MINT-1160606; -.
Enzyme and pathway databasesReactome REACT_11063; Degradation of beta-catenin by the destruction complex.
Enzyme and pathway databasesReactome REACT_111056; Cross-presentation of soluble exogenous antigens (endosomes).
Enzyme and pathway databasesReactome REACT_111178; ER-Phagosome pathway.
Enzyme and pathway databasesReactome REACT_1156; Orc1 removal from chromatin.
Enzyme and pathway databasesReactome REACT_118656; Activation of NF-kappaB in B cells.
Enzyme and pathway databasesReactome REACT_1221; CDK-mediated phosphorylation and removal of Cdc6.
Enzyme and pathway databasesReactome REACT_13464; Regulation of activated PAK-2p34 by proteasome mediated degradation.
Enzyme and pathway databasesReactome REACT_13565; Regulation of ornithine decarboxylase (ODC).
Enzyme and pathway databasesReactome REACT_150471; Separation of Sister Chromatids.
Enzyme and pathway databasesReactome REACT_1614; Ubiquitin Mediated Degradation of Phosphorylated Cdc25A.
Enzyme and pathway databasesReactome REACT_172638; Asymmetric localization of PCP proteins.
Enzyme and pathway databasesReactome REACT_1949; CDT1 association with the CDC6:ORC:origin complex.
Enzyme and pathway databasesReactome REACT_200766; degradation of AXIN.
Enzyme and pathway databasesReactome REACT_200841; degradation of DVL.
Enzyme and pathway databasesReactome REACT_20549; Autodegradation of the E3 ubiquitin ligase COP1.
Enzyme and pathway databasesReactome REACT_206597; Degradation of GLI2 by the proteasome.
Enzyme and pathway databasesReactome REACT_228111; Hedgehog ligand biogenesis.
Enzyme and pathway databasesReactome REACT_228209; Hh ligand biogenesis disease.
Enzyme and pathway databasesReactome REACT_231645; GLI3 is processed to GLI3R by the proteasome.
Enzyme and pathway databasesReactome REACT_25325; AUF1 (hnRNP D0) destabilizes mRNA.
Enzyme and pathway databasesReactome REACT_267605; Degradation of GLI1 by the proteasome.
Enzyme and pathway databasesReactome REACT_4; Ubiquitin-dependent degradation of Cyclin D1.
Enzyme and pathway databasesReactome REACT_6761; APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1.
Enzyme and pathway databasesReactome REACT_6785; Autodegradation of Cdh1 by Cdh1:APC/C.
Enzyme and pathway databasesReactome REACT_6821; SCF-beta-TrCP mediated degradation of Emi1.
Enzyme and pathway databasesReactome REACT_6871; APC/C:Cdc20 mediated degradation of Securin.
Enzyme and pathway databasesReactome REACT_75842; Antigen processing: Ubiquitination & Proteasome degradation.
Enzyme and pathway databasesReactome REACT_9003; SCF(Skp2)-mediated degradation of p27/p21.
Enzyme and pathway databasesReactome REACT_9031; Vpu mediated degradation of CD4.
Enzyme and pathway databasesReactome REACT_9453; Vif-mediated degradation of APOBEC3G.
3D structure databasesProteinModelPortal Q99460; -.
3D structure databasesSMR Q99460; 3-814.
Phylogenomic databaseseggNOG COG5116; -.
Phylogenomic databasesGeneTree ENSGT00550000074915; -.
Phylogenomic databasesHOVERGEN HBG007543; -.
Phylogenomic databasesInParanoid Q99460; -.
Phylogenomic databasesKO K03032; -.
Phylogenomic databasesOMA TESCRYQ; -.
Phylogenomic databasesOrthoDB EOG790G01; -.
Phylogenomic databasesPhylomeDB Q99460; -.
Phylogenomic databasesTreeFam TF105742; -.
Organism-specific databasesCTD 5707; -.
Organism-specific databasesGeneCards GC02P231921; -.
Organism-specific databasesHGNC HGNC:9554; PSMD1.
Organism-specific databasesHPA CAB021092; -.
Organism-specific databasesHPA HPA036736; -.
Organism-specific databasesneXtProt NX_Q99460; -.
Organism-specific databasesPharmGKB PA33899; -.
ChemistryDrugBank DB00188; Bortezomib.
OtherChiTaRS PSMD1; human.
OtherGeneWiki PSMD1; -.
OtherGenomeRNAi 5707; -.
OtherNextBio 22174; -.
OtherPRO PR:Q99460; -.



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