Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 6095
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000261523; ENSP00000261523; ENSG00000069667. [P35398-1]
Genome annotation databasesEnsembl ENST00000309157; ENSP00000309753; ENSG00000069667.
Genome annotation databasesEnsembl ENST00000335670; ENSP00000335087; ENSG00000069667. [P35398-2]
Genome annotation databasesEnsembl ENST00000449337; ENSP00000402971; ENSG00000069667.
Genome annotation databasesGeneID 6095; -.
Genome annotation databasesKEGG hsa:6095; -.
Genome annotation databasesUCSC uc002agt.4; human. [P35398-4]
Genome annotation databasesUCSC uc002agv.3; human. [P35398-2]
Genome annotation databasesUCSC uc002agw.3; human. [P35398-3]
Genome annotation databasesUCSC uc002agx.3; human. [P35398-2]
Sequence databasesCCDS CCDS10177.1; -. [P35398-2]
Sequence databasesCCDS CCDS10179.1; -. [P35398-1]
Sequence databasesCCDS CCDS45271.1; -. [P35398-4]
Sequence databasesEMBL U04897; AAA62658.1; -; mRNA.
Sequence databasesEMBL U04898; AAA62659.1; -; mRNA.
Sequence databasesEMBL U04899; AAA62660.1; -; mRNA.
Sequence databasesEMBL L14611; AAA02963.1; -; mRNA.
Sequence databasesEMBL HQ692818; ADZ17329.1; -; mRNA.
Sequence databasesEMBL AC009560; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL AC012404; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL AC022898; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL AC079068; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL AC087385; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL AC107241; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL AC107905; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL CH471082; EAW77594.1; -; Genomic_DNA.
Sequence databasesEMBL BC008831; AAH08831.1; -; mRNA.
Sequence databasesEMBL BC100987; AAI00988.1; -; mRNA.
Sequence databasesEMBL BC100988; AAI00989.1; -; mRNA.
Sequence databasesEMBL BC100989; AAI00990.1; -; mRNA.
Sequence databasesEMBL BC100990; AAI00991.1; -; mRNA.
Sequence databasesPIR A53196; A53196.
Sequence databasesPIR A56856; A56856.
Sequence databasesPIR B53196; B53196.
Sequence databasesPIR C53196; C53196.
Sequence databasesRefSeq NP_002934.1; NM_002943.3.
Sequence databasesRefSeq NP_599022.1; NM_134260.2. [P35398-1]
Sequence databasesRefSeq NP_599023.1; NM_134261.2. [P35398-2]
Sequence databasesRefSeq NP_599024.1; NM_134262.2.
Sequence databasesUniGene Hs.560343; -.
Polymorphism databasesDMDM 548814; -.
Gene expression databasesBgee P35398; -.
Gene expression databasesCleanEx HS_RORA; -.
Gene expression databasesExpressionAtlas P35398; baseline and differential.
Gene expression databasesGenevestigator P35398; -.
OntologiesGO GO:0005654; C:nucleoplasm; TAS:Reactome.
OntologiesGO GO:0005634; C:nucleus; IDA:UniProtKB.
OntologiesGO GO:0098531; F:direct ligand regulated sequence-specific DNA binding transcription factor activity; IDA:UniProtKB.
OntologiesGO GO:0003677; F:DNA binding; IDA:UniProtKB.
OntologiesGO GO:0004879; F:ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity; IEA:InterPro.
OntologiesGO GO:0008142; F:oxysterol binding; IDA:UniProtKB.
OntologiesGO GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.
OntologiesGO GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:UniProtKB.
OntologiesGO GO:0003707; F:steroid hormone receptor activity; IEA:InterPro.
OntologiesGO GO:0001223; F:transcription coactivator binding; IPI:UniProtKB.
OntologiesGO GO:0001222; F:transcription corepressor binding; IPI:UniProtKB.
OntologiesGO GO:0008134; F:transcription factor binding; IPI:UniProtKB.
OntologiesGO GO:0008270; F:zinc ion binding; IEA:InterPro.
OntologiesGO GO:0001525; P:angiogenesis; IMP:UniProtKB.
OntologiesGO GO:0071456; P:cellular response to hypoxia; IMP:UniProtKB.
OntologiesGO GO:0036315; P:cellular response to sterol; IDA:UniProtKB.
OntologiesGO GO:0021930; P:cerebellar granule cell precursor proliferation; ISS:UniProtKB.
OntologiesGO GO:0021702; P:cerebellar Purkinje cell differentiation; IEA:Ensembl.
OntologiesGO GO:0046068; P:cGMP metabolic process; IEA:Ensembl.
OntologiesGO GO:0032922; P:circadian regulation of gene expression; ISS:UniProtKB.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0030522; P:intracellular receptor signaling pathway; IDA:UniProtKB.
OntologiesGO GO:0042692; P:muscle cell differentiation; IMP:UniProtKB.
OntologiesGO GO:0045599; P:negative regulation of fat cell differentiation; ISS:UniProtKB.
OntologiesGO GO:0043124; P:negative regulation of I-kappaB kinase/NF-kappaB signaling; IMP:UniProtKB.
OntologiesGO GO:0050728; P:negative regulation of inflammatory response; IMP:UniProtKB.
OntologiesGO GO:0006809; P:nitric oxide biosynthetic process; IEA:Ensembl.
OntologiesGO GO:0042753; P:positive regulation of circadian rhythm; ISS:UniProtKB.
OntologiesGO GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.
OntologiesGO GO:0045893; P:positive regulation of transcription, DNA-templated; IDA:UniProtKB.
OntologiesGO GO:0010575; P:positive regulation vascular endothelial growth factor production; IMP:UniProtKB.
OntologiesGO GO:2000188; P:regulation of cholesterol homeostasis; ISS:UniProtKB.
OntologiesGO GO:0010906; P:regulation of glucose metabolic process; ISS:UniProtKB.
OntologiesGO GO:0043030; P:regulation of macrophage activation; IEA:Ensembl.
OntologiesGO GO:0008589; P:regulation of smoothened signaling pathway; ISS:UniProtKB.
OntologiesGO GO:0019218; P:regulation of steroid metabolic process; ISS:UniProtKB.
OntologiesGO GO:0060850; P:regulation of transcription involved in cell fate commitment; ISS:UniProtKB.
OntologiesGO GO:0006355; P:regulation of transcription, DNA-templated; IDA:UniProtKB.
OntologiesGO GO:0072539; P:T-helper 17 cell differentiation; ISS:UniProtKB.
OntologiesGO GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.
OntologiesGO GO:0070328; P:triglyceride homeostasis; IMP:UniProtKB.
OntologiesGO GO:0006805; P:xenobiotic metabolic process; ISS:UniProtKB.
Proteomic databasesPaxDb P35398; -.
Proteomic databasesPRIDE P35398; -.
Family and domain databasesGene3D 1.10.565.10; -; 2.
Family and domain databasesGene3D 3.30.50.10; -; 1.
Family and domain databasesInterPro IPR008946; Nucl_hormone_rcpt_ligand-bd.
Family and domain databasesInterPro IPR000536; Nucl_hrmn_rcpt_lig-bd_core.
Family and domain databasesInterPro IPR003079; ROR_rcpt.
Family and domain databasesInterPro IPR001723; Str_hrmn_rcpt.
Family and domain databasesInterPro IPR001628; Znf_hrmn_rcpt.
Family and domain databasesInterPro IPR013088; Znf_NHR/GATA.
Family and domain databasesPfam PF00104; Hormone_recep; 1.
Family and domain databasesPfam PF00105; zf-C4; 1.
Family and domain databasesPRINTS PR01293; RORNUCRECPTR.
Family and domain databasesPRINTS PR00398; STRDHORMONER.
Family and domain databasesPRINTS PR00047; STROIDFINGER.
Family and domain databasesPROSITE PS00031; NUCLEAR_REC_DBD_1; 1.
Family and domain databasesPROSITE PS51030; NUCLEAR_REC_DBD_2; 1.
Family and domain databasesSMART SM00430; HOLI; 1.
Family and domain databasesSMART SM00399; ZnF_C4; 1.
Family and domain databasesSUPFAM SSF48508; SSF48508; 1.
PTM databasesPhosphoSite P35398; -.
Protein-protein interaction databasesBioGrid 112022; 24.
Protein-protein interaction databasesDIP DIP-29938N; -.
Protein-protein interaction databasesIntAct P35398; 5.
Protein-protein interaction databasesMINT MINT-2855668; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000261523; -.
Enzyme and pathway databasesReactome REACT_111118; BMAL1:CLOCK,NPAS2 activates circadian gene expression.
Enzyme and pathway databasesReactome REACT_116145; PPARA activates gene expression.
Enzyme and pathway databasesReactome REACT_118659; RORA activates circadian gene expression.
Enzyme and pathway databasesReactome REACT_118789; REV-ERBA represses gene expression.
Enzyme and pathway databasesReactome REACT_15525; Nuclear Receptor transcription pathway.
Enzyme and pathway databasesReactome REACT_24941; Circadian Clock.
Enzyme and pathway databasesSignaLink P35398; -.
3D structure databasesPDB 1N83; X-ray; 1.63 A; A=271-523.
3D structure databasesPDB 1S0X; X-ray; 2.20 A; A=271-523.
3D structure databasesPDBsum 1N83; -.
3D structure databasesPDBsum 1S0X; -.
3D structure databasesProteinModelPortal P35398; -.
3D structure databasesSMR P35398; 73-170, 271-511.
Phylogenomic databaseseggNOG NOG324222; -.
Phylogenomic databasesGeneTree ENSGT00760000119049; -.
Phylogenomic databasesHOGENOM HOG000010200; -.
Phylogenomic databasesHOVERGEN HBG106848; -.
Phylogenomic databasesInParanoid P35398; -.
Phylogenomic databasesKO K08532; -.
Phylogenomic databasesOMA GHCLTGQ; -.
Phylogenomic databasesOrthoDB EOG79PJNW; -.
Phylogenomic databasesTreeFam TF319910; -.
Organism-specific databasesCTD 6095; -.
Organism-specific databasesGeneCards GC15M060780; -.
Organism-specific databasesHGNC HGNC:10258; RORA.
Organism-specific databasesHPA CAB009861; -.
Organism-specific databasesMIM 600825; gene.
Organism-specific databasesneXtProt NX_P35398; -.
Organism-specific databasesPharmGKB PA34630; -.
ChemistryBindingDB P35398; -.
ChemistryChEMBL CHEMBL5868; -.
ChemistryGuidetoPHARMACOLOGY 598; -.
OtherChiTaRS RORA; human.
OtherEvolutionaryTrace P35398; -.
OtherGeneWiki RAR-related_orphan_receptor_alpha; -.
OtherGenomeRNAi 6095; -.
OtherNextBio 23703; -.
OtherPRO PR:P35398; -.



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