Cancer Cell Metabolism Gene Database

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 6121
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000262340; ENSP00000262340; ENSG00000116745.
Genome annotation databasesGeneID 6121; -.
Genome annotation databasesKEGG hsa:6121; -.
Genome annotation databasesUCSC uc001dei.1; human.
Sequence databasesCCDS CCDS643.1; -.
Sequence databasesEMBL U18991; AAA99012.1; -; mRNA.
Sequence databasesEMBL U20510; AAC14586.1; -; Genomic_DNA.
Sequence databasesEMBL U20476; AAC14586.1; JOINED; Genomic_DNA.
Sequence databasesEMBL U20477; AAC14586.1; JOINED; Genomic_DNA.
Sequence databasesEMBL U20478; AAC14586.1; JOINED; Genomic_DNA.
Sequence databasesEMBL U20479; AAC14586.1; JOINED; Genomic_DNA.
Sequence databasesEMBL U20481; AAC14586.1; JOINED; Genomic_DNA.
Sequence databasesEMBL U20482; AAC14586.1; JOINED; Genomic_DNA.
Sequence databasesEMBL U20484; AAC14586.1; JOINED; Genomic_DNA.
Sequence databasesEMBL U20485; AAC14586.1; JOINED; Genomic_DNA.
Sequence databasesEMBL U20486; AAC14586.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF039868; AAC39660.1; -; Genomic_DNA.
Sequence databasesEMBL AF039855; AAC39660.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF039856; AAC39660.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF039857; AAC39660.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF039858; AAC39660.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF039859; AAC39660.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF039860; AAC39660.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF039861; AAC39660.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF039862; AAC39660.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF039863; AAC39660.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF039864; AAC39660.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF039865; AAC39660.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF039866; AAC39660.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF039867; AAC39660.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AK289925; BAF82614.1; -; mRNA.
Sequence databasesEMBL AL139413; CAI18957.1; -; Genomic_DNA.
Sequence databasesEMBL CH471059; EAX06478.1; -; Genomic_DNA.
Sequence databasesEMBL BC075035; AAH75035.1; -; mRNA.
Sequence databasesEMBL BC075036; AAH75036.1; -; mRNA.
Sequence databasesRefSeq NP_000320.1; NM_000329.2.
Sequence databasesUniGene Hs.2133; -.
Polymorphism databasesDMDM 44888872; -.
Gene expression databasesBgee Q16518; -.
Gene expression databasesCleanEx HS_RPE65; -.
Gene expression databasesExpressionAtlas Q16518; baseline.
Gene expression databasesGenevestigator Q16518; -.
OntologiesGO GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-KW.
OntologiesGO GO:0005886; C:plasma membrane; TAS:Reactome.
OntologiesGO GO:0052885; F:all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity; IEA:UniProtKB-EC.
OntologiesGO GO:0052884; F:all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming activity; IEA:UniProtKB-EC.
OntologiesGO GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
OntologiesGO GO:0004744; F:retinal isomerase activity; IEA:Ensembl.
OntologiesGO GO:0071257; P:cellular response to electrical stimulus; IEA:Ensembl.
OntologiesGO GO:0050908; P:detection of light stimulus involved in visual perception; IMP:UniProt.
OntologiesGO GO:0008286; P:insulin receptor signaling pathway; IEA:Ensembl.
OntologiesGO GO:0007603; P:phototransduction, visible light; TAS:Reactome.
OntologiesGO GO:0007468; P:regulation of rhodopsin gene expression; IEA:Ensembl.
OntologiesGO GO:0001895; P:retina homeostasis; IMP:UniProt.
OntologiesGO GO:0060042; P:retina morphogenesis in camera-type eye; IEA:Ensembl.
OntologiesGO GO:0042574; P:retinal metabolic process; IEA:Ensembl.
OntologiesGO GO:0001523; P:retinoid metabolic process; TAS:Reactome.
OntologiesGO GO:0007601; P:visual perception; TAS:ProtInc.
OntologiesGO GO:0006776; P:vitamin A metabolic process; TAS:ProtInc.
Proteomic databasesPaxDb Q16518; -.
Proteomic databasesPRIDE Q16518; -.
Family and domain databasesInterPro IPR004294; Carotenoid_Oase.
Family and domain databasesPANTHER PTHR10543; PTHR10543; 1.
Family and domain databasesPfam PF03055; RPE65; 1.
PTM databasesPhosphoSite Q16518; -.
Protein-protein interaction databasesBioGrid 112041; 4.
Protein-protein interaction databasesSTRING 9606.ENSP00000262340; -.
Enzyme and pathway databasesBioCyc MetaCyc:ENSG00000116745-MONOMER; -.
Enzyme and pathway databasesReactome REACT_160156; The canonical retinoid cycle in rods (twilight vision).
3D structure databasesProteinModelPortal Q16518; -.
3D structure databasesSMR Q16518; 4-533.
Phylogenomic databaseseggNOG COG3670; -.
Phylogenomic databasesGeneTree ENSGT00500000044783; -.
Phylogenomic databasesHOGENOM HOG000232156; -.
Phylogenomic databasesHOVERGEN HBG050679; -.
Phylogenomic databasesInParanoid Q16518; -.
Phylogenomic databasesKO K11158; -.
Phylogenomic databasesOMA TIREPSV; -.
Phylogenomic databasesOrthoDB EOG7353WB; -.
Phylogenomic databasesPhylomeDB Q16518; -.
Phylogenomic databasesTreeFam TF314019; -.
Organism-specific databasesCTD 6121; -.
Organism-specific databasesGeneCards GC01M068894; -.
Organism-specific databasesGeneReviews RPE65; -.
Organism-specific databasesHGNC HGNC:10294; RPE65.
Organism-specific databasesMIM 180069; gene.
Organism-specific databasesMIM 204100; phenotype.
Organism-specific databasesMIM 613794; phenotype.
Organism-specific databasesneXtProt NX_Q16518; -.
Organism-specific databasesOrphanet 180; Choroideremia.
Organism-specific databasesOrphanet 65; Leber congenital amaurosis.
Organism-specific databasesOrphanet 791; Retinitis pigmentosa.
Organism-specific databasesOrphanet 364055; Severe early-childhood-onset retinal dystrophy.
Organism-specific databasesPharmGKB PA34655; -.
OtherChiTaRS RPE65; human.
OtherGeneWiki RPE65; -.
OtherGenomeRNAi 6121; -.
OtherNextBio 23773; -.
OtherPRO PR:Q16518; -.



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