Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 6130
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000323345; ENSP00000361076; ENSG00000148303.
Genome annotation databasesGeneID 6130; -.
Genome annotation databasesKEGG hsa:6130; -.
Genome annotation databasesUCSC uc004cde.1; human.
Sequence databasesCCDS CCDS6965.1; -.
Sequence databasesEMBL X06705; CAA29889.1; -; mRNA.
Sequence databasesEMBL X52138; CAA36383.1; -; Genomic_DNA.
Sequence databasesEMBL X61923; CAA43925.1; -; Genomic_DNA.
Sequence databasesEMBL M36072; AAA60282.1; -; mRNA.
Sequence databasesEMBL AK291123; BAF83812.1; -; mRNA.
Sequence databasesEMBL AK311743; BAG34686.1; -; mRNA.
Sequence databasesEMBL AL158826; CAI12832.1; -; Genomic_DNA.
Sequence databasesEMBL CH471090; EAW88063.1; -; Genomic_DNA.
Sequence databasesEMBL BC005128; AAH05128.1; -; mRNA.
Sequence databasesEMBL BC021979; AAH21979.1; -; mRNA.
Sequence databasesEMBL BC023594; AAH23594.1; -; mRNA.
Sequence databasesEMBL BC023624; AAH23624.1; -; mRNA.
Sequence databasesEMBL BC071900; AAH71900.1; -; mRNA.
Sequence databasesEMBL BC071901; AAH71901.1; -; mRNA.
Sequence databasesEMBL BC073802; AAH73802.1; -; mRNA.
Sequence databasesEMBL BC105290; AAI05291.1; -; mRNA.
Sequence databasesPIR S19717; R5HU7A.
Sequence databasesRefSeq NP_000963.1; NM_000972.2.
Sequence databasesUniGene Hs.499839; -.
Polymorphism databasesDMDM 54039239; -.
Gene expression databasesBgee P62424; -.
Gene expression databasesCleanEx HS_RPL7A; -.
Gene expression databasesExpressionAtlas P62424; baseline.
Gene expression databasesGenevestigator P62424; -.
OntologiesGO GO:0005829; C:cytosol; TAS:Reactome.
OntologiesGO GO:0022625; C:cytosolic large ribosomal subunit; IDA:UniProtKB.
OntologiesGO GO:0070062; C:extracellular vesicular exosome; IDA:UniProt.
OntologiesGO GO:0005925; C:focal adhesion; IDA:UniProtKB.
OntologiesGO GO:0016020; C:membrane; IDA:BHF-UCL.
OntologiesGO GO:0005634; C:nucleus; IDA:UniProt.
OntologiesGO GO:0042788; C:polysomal ribosome; IDA:HGNC.
OntologiesGO GO:0044822; F:poly(A) RNA binding; IDA:UniProtKB.
OntologiesGO GO:0003723; F:RNA binding; TAS:ProtInc.
OntologiesGO GO:0003735; F:structural constituent of ribosome; NAS:UniProtKB.
OntologiesGO GO:0044267; P:cellular protein metabolic process; TAS:Reactome.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0016071; P:mRNA metabolic process; TAS:Reactome.
OntologiesGO GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; TAS:Reactome.
OntologiesGO GO:0042254; P:ribosome biogenesis; IEA:InterPro.
OntologiesGO GO:0016070; P:RNA metabolic process; TAS:Reactome.
OntologiesGO GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; TAS:Reactome.
OntologiesGO GO:0006412; P:translation; NAS:UniProtKB.
OntologiesGO GO:0006414; P:translational elongation; TAS:Reactome.
OntologiesGO GO:0006413; P:translational initiation; TAS:Reactome.
OntologiesGO GO:0006415; P:translational termination; TAS:Reactome.
OntologiesGO GO:0019058; P:viral life cycle; TAS:Reactome.
OntologiesGO GO:0016032; P:viral process; TAS:Reactome.
OntologiesGO GO:0019083; P:viral transcription; TAS:Reactome.
Proteomic databasesMaxQB P62424; -.
Proteomic databasesPaxDb P62424; -.
Proteomic databasesPRIDE P62424; -.
Family and domain databasesGene3D 3.30.1330.30; -; 1.
Family and domain databasesInterPro IPR029064; L30e-like.
Family and domain databasesInterPro IPR001921; Ribosomal_L7A/L8.
Family and domain databasesInterPro IPR004038; Ribosomal_L7Ae/L30e/S12e/Gad45.
Family and domain databasesInterPro IPR018492; Ribosomal_L7Ae/L8/Nhp2.
Family and domain databasesInterPro IPR004037; Ribosomal_L7Ae_CS.
Family and domain databasesPANTHER PTHR23105:SF29; PTHR23105:SF29; 1.
Family and domain databasesPfam PF01248; Ribosomal_L7Ae; 1.
Family and domain databasesPRINTS PR00881; L7ARS6FAMILY.
Family and domain databasesPRINTS PR00882; RIBOSOMALL7A.
Family and domain databasesPROSITE PS01082; RIBOSOMAL_L7AE; 1.
Family and domain databasesSUPFAM SSF55315; SSF55315; 1.
PTM databasesPhosphoSite P62424; -.
Protein-protein interaction databasesBioGrid 112050; 127.
Protein-protein interaction databasesDIP DIP-31502N; -.
Protein-protein interaction databasesIntAct P62424; 28.
Protein-protein interaction databasesMINT MINT-1149515; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000361076; -.
Enzyme and pathway databasesReactome REACT_115902; SRP-dependent cotranslational protein targeting to membrane.
Enzyme and pathway databasesReactome REACT_1404; Peptide chain elongation.
Enzyme and pathway databasesReactome REACT_1797; Formation of a pool of free 40S subunits.
Enzyme and pathway databasesReactome REACT_1986; Eukaryotic Translation Termination.
Enzyme and pathway databasesReactome REACT_2085; GTP hydrolysis and joining of the 60S ribosomal subunit.
Enzyme and pathway databasesReactome REACT_75768; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
Enzyme and pathway databasesReactome REACT_75822; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
Enzyme and pathway databasesReactome REACT_79; L13a-mediated translational silencing of Ceruloplasmin expression.
Enzyme and pathway databasesReactome REACT_9491; Viral mRNA Translation.
2D gel databasesSWISS-2DPAGE P62424; -.
3D structure databasesPDB 3J3B; EM; 5.00 A; G=1-266.
3D structure databasesPDBsum 3J3B; -.
3D structure databasesProteinModelPortal P62424; -.
3D structure databasesSMR P62424; 21-266.
Protocols and materials databasesDNASU 6130; -.
Phylogenomic databaseseggNOG COG1358; -.
Phylogenomic databasesGeneTree ENSGT00390000004753; -.
Phylogenomic databasesHOGENOM HOG000216644; -.
Phylogenomic databasesHOVERGEN HBG002936; -.
Phylogenomic databasesInParanoid P62424; -.
Phylogenomic databasesKO K02936; -.
Phylogenomic databasesOMA PKYIRVQ; -.
Phylogenomic databasesPhylomeDB P62424; -.
Phylogenomic databasesTreeFam TF300788; -.
Organism-specific databasesCTD 6130; -.
Organism-specific databasesGeneCards GC09P136215; -.
Organism-specific databasesHGNC HGNC:10364; RPL7A.
Organism-specific databasesHPA HPA046794; -.
Organism-specific databasesMIM 185640; gene.
Organism-specific databasesneXtProt NX_P62424; -.
Organism-specific databasesPharmGKB PA34760; -.
OtherChiTaRS RPL7A; human.
OtherGeneWiki RPL7A; -.
OtherGenomeRNAi 6130; -.
OtherNextBio 23809; -.
OtherPRO PR:P62424; -.



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