Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 6209
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000592588; ENSP00000467466; ENSG00000115268.
Genome annotation databasesGeneID 6209; -.
Genome annotation databasesKEGG hsa:6209; -.
Genome annotation databasesUCSC uc002lsp.1; human.
Sequence databasesCCDS CCDS12067.1; -.
Sequence databasesEMBL J02984; AAA36036.1; -; mRNA.
Sequence databasesEMBL M32405; AAA36568.1; -; Genomic_DNA.
Sequence databasesEMBL AF145025; AAP97277.1; -; mRNA.
Sequence databasesEMBL BC064908; AAH64908.1; -; mRNA.
Sequence databasesEMBL BC105810; AAI05811.1; -; mRNA.
Sequence databasesEMBL BC141832; AAI41833.1; -; mRNA.
Sequence databasesPIR A35908; R3HU15.
Sequence databasesRefSeq NP_001009.1; NM_001018.3.
Sequence databasesUniGene Hs.406683; -.
Polymorphism databasesDMDM 51338641; -.
Gene expression databasesBgee P62841; -.
Gene expression databasesCleanEx HS_RPS15; -.
Gene expression databasesExpressionAtlas P62841; baseline.
Gene expression databasesGenevestigator P62841; -.
OntologiesGO GO:0005829; C:cytosol; TAS:Reactome.
OntologiesGO GO:0022627; C:cytosolic small ribosomal subunit; IDA:UniProtKB.
OntologiesGO GO:0005925; C:focal adhesion; IDA:UniProtKB.
OntologiesGO GO:0016020; C:membrane; IDA:UniProtKB.
OntologiesGO GO:0005654; C:nucleoplasm; NAS:UniProtKB.
OntologiesGO GO:0005634; C:nucleus; NAS:UniProtKB.
OntologiesGO GO:0003677; F:DNA binding; NAS:UniProtKB.
OntologiesGO GO:0044822; F:poly(A) RNA binding; IDA:UniProtKB.
OntologiesGO GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
OntologiesGO GO:0044267; P:cellular protein metabolic process; TAS:Reactome.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0016071; P:mRNA metabolic process; TAS:Reactome.
OntologiesGO GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; TAS:Reactome.
OntologiesGO GO:0001649; P:osteoblast differentiation; IDA:UniProt.
OntologiesGO GO:0042274; P:ribosomal small subunit biogenesis; IMP:UniProtKB.
OntologiesGO GO:0000056; P:ribosomal small subunit export from nucleus; IMP:UniProtKB.
OntologiesGO GO:0016070; P:RNA metabolic process; TAS:Reactome.
OntologiesGO GO:0006364; P:rRNA processing; IMP:UniProtKB.
OntologiesGO GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; TAS:Reactome.
OntologiesGO GO:0006412; P:translation; IC:UniProtKB.
OntologiesGO GO:0006414; P:translational elongation; TAS:Reactome.
OntologiesGO GO:0006413; P:translational initiation; TAS:Reactome.
OntologiesGO GO:0006415; P:translational termination; TAS:Reactome.
OntologiesGO GO:0019058; P:viral life cycle; TAS:Reactome.
OntologiesGO GO:0016032; P:viral process; TAS:Reactome.
OntologiesGO GO:0019083; P:viral transcription; TAS:Reactome.
Proteomic databasesMaxQB P62841; -.
Proteomic databasesPaxDb P62841; -.
Proteomic databasesPRIDE P62841; -.
Family and domain databasesGene3D 3.30.860.10; -; 1.
Family and domain databasesHAMAP MF_00531; Ribosomal_S19; 1.
Family and domain databasesInterPro IPR002222; Ribosomal_S19.
Family and domain databasesInterPro IPR020934; Ribosomal_S19_CS.
Family and domain databasesInterPro IPR023575; Ribosomal_S19_SF.
Family and domain databasesInterPro IPR005713; Ribosomal_S19A/S15e.
Family and domain databasesPANTHER PTHR11880; PTHR11880; 1.
Family and domain databasesPfam PF00203; Ribosomal_S19; 1.
Family and domain databasesPIRSF PIRSF002144; Ribosomal_S19; 1.
Family and domain databasesPRINTS PR00975; RIBOSOMALS19.
Family and domain databasesPROSITE PS00323; RIBOSOMAL_S19; 1.
Family and domain databasesSUPFAM SSF54570; SSF54570; 1.
Family and domain databasesTIGRFAMs TIGR01025; rpsS_arch; 1.
PTM databasesPhosphoSite P62841; -.
Protein-protein interaction databasesBioGrid 112123; 76.
Protein-protein interaction databasesIntAct P62841; 10.
Protein-protein interaction databasesMINT MINT-5004408; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000233609; -.
Enzyme and pathway databasesReactome REACT_1079; Formation of the ternary complex, and subsequently, the 43S complex.
Enzyme and pathway databasesReactome REACT_115902; SRP-dependent cotranslational protein targeting to membrane.
Enzyme and pathway databasesReactome REACT_1404; Peptide chain elongation.
Enzyme and pathway databasesReactome REACT_1797; Formation of a pool of free 40S subunits.
Enzyme and pathway databasesReactome REACT_1979; Translation initiation complex formation.
Enzyme and pathway databasesReactome REACT_1986; Eukaryotic Translation Termination.
Enzyme and pathway databasesReactome REACT_2085; GTP hydrolysis and joining of the 60S ribosomal subunit.
Enzyme and pathway databasesReactome REACT_75768; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
Enzyme and pathway databasesReactome REACT_75822; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
Enzyme and pathway databasesReactome REACT_79; L13a-mediated translational silencing of Ceruloplasmin expression.
Enzyme and pathway databasesReactome REACT_931; Ribosomal scanning and start codon recognition.
Enzyme and pathway databasesReactome REACT_9491; Viral mRNA Translation.
3D structure databasesPDB 2ZKQ; EM; 8.70 A; s=1-145.
3D structure databasesPDB 3J3A; EM; 5.00 A; P=1-145.
3D structure databasesPDBsum 2ZKQ; -.
3D structure databasesPDBsum 3J3A; -.
3D structure databasesProteinModelPortal P62841; -.
3D structure databasesSMR P62841; 4-130.
Protocols and materials databasesDNASU 6209; -.
Phylogenomic databaseseggNOG COG0185; -.
Phylogenomic databasesGeneTree ENSGT00390000000475; -.
Phylogenomic databasesHOGENOM HOG000111561; -.
Phylogenomic databasesHOVERGEN HBG000709; -.
Phylogenomic databasesInParanoid P62841; -.
Phylogenomic databasesKO K02958; -.
Phylogenomic databasesOrthoDB EOG780RPS; -.
Phylogenomic databasesPhylomeDB P62841; -.
Organism-specific databasesCTD 6209; -.
Organism-specific databasesGeneCards GC19P001438; -.
Organism-specific databasesHGNC HGNC:10388; RPS15.
Organism-specific databasesHPA HPA054510; -.
Organism-specific databasesHPA HPA057793; -.
Organism-specific databasesMIM 180535; gene.
Organism-specific databasesneXtProt NX_P62841; -.
Organism-specific databasesPharmGKB PA34787; -.
OtherChiTaRS RPS15; human.
OtherEvolutionaryTrace P62841; -.
OtherGeneWiki RPS15; -.
OtherGenomeRNAi 6209; -.
OtherNextBio 24119; -.
OtherPMAP-CutDB P62841; -.
OtherPRO PR:P62841; -.



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