Cancer Cell Metabolism Gene Database

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 9125
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000273064; ENSP00000273064; ENSG00000144580. [Q92600-1]
Genome annotation databasesEnsembl ENST00000295701; ENSP00000295701; ENSG00000144580. [Q92600-3]
Genome annotation databasesEnsembl ENST00000542068; ENSP00000443687; ENSG00000144580. [Q92600-1]
Genome annotation databasesGeneID 9125; -.
Genome annotation databasesKEGG hsa:9125; -.
Genome annotation databasesUCSC uc010zkh.3; human. [Q92600-1]
Sequence databasesCCDS CCDS33379.1; -. [Q92600-1]
Sequence databasesCCDS CCDS63123.1; -. [Q92600-3]
Sequence databasesEMBL D87957; BAA13508.1; -; Genomic_DNA.
Sequence databasesEMBL AK293281; BAH11481.1; -; mRNA.
Sequence databasesEMBL AC012510; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL CH471063; EAW70625.1; -; Genomic_DNA.
Sequence databasesEMBL CH471063; EAW70624.1; -; Genomic_DNA.
Sequence databasesEMBL BC007102; AAH07102.2; ALT_INIT; mRNA.
Sequence databasesEMBL BC137455; AAI37456.1; -; mRNA.
Sequence databasesEMBL BC137456; AAI37457.1; -; mRNA.
Sequence databasesRefSeq NP_001258563.1; NM_001271634.1. [Q92600-2]
Sequence databasesRefSeq NP_001258564.1; NM_001271635.1. [Q92600-3]
Sequence databasesRefSeq NP_005435.1; NM_005444.2. [Q92600-1]
Sequence databasesUniGene Hs.148767; -.
Polymorphism databasesDMDM 74716599; -.
Gene expression databasesBgee Q92600; -.
Gene expression databasesCleanEx HS_RQCD1; -.
Gene expression databasesExpressionAtlas Q92600; baseline and differential.
Gene expression databasesGenevestigator Q92600; -.
OntologiesGO GO:0030014; C:CCR4-NOT complex; IDA:UniProtKB.
OntologiesGO GO:0000932; C:cytoplasmic mRNA processing body; ISS:UniProtKB.
OntologiesGO GO:0005829; C:cytosol; TAS:Reactome.
OntologiesGO GO:0016020; C:membrane; IDA:UniProtKB.
OntologiesGO GO:0005634; C:nucleus; IEA:UniProtKB-KW.
OntologiesGO GO:0019221; P:cytokine-mediated signaling pathway; IEA:Ensembl.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.
OntologiesGO GO:0016071; P:mRNA metabolic process; TAS:Reactome.
OntologiesGO GO:0033147; P:negative regulation of intracellular estrogen receptor signaling pathway; IMP:UniProtKB.
OntologiesGO GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; TAS:Reactome.
OntologiesGO GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; TAS:Reactome.
OntologiesGO GO:2000327; P:positive regulation of ligand-dependent nuclear receptor transcription coactivator activity; IDA:UniProtKB.
OntologiesGO GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-KW.
OntologiesGO GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
OntologiesGO GO:0016070; P:RNA metabolic process; TAS:Reactome.
OntologiesGO GO:0007548; P:sex differentiation; TAS:ProtInc.
OntologiesGO GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
Proteomic databasesMaxQB Q92600; -.
Proteomic databasesPaxDb Q92600; -.
Proteomic databasesPRIDE Q92600; -.
Family and domain databasesGene3D 1.25.10.10; -; 1.
Family and domain databasesInterPro IPR011989; ARM-like.
Family and domain databasesInterPro IPR016024; ARM-type_fold.
Family and domain databasesInterPro IPR007216; Rcd1.
Family and domain databasesPANTHER PTHR12262; PTHR12262; 1.
Family and domain databasesPfam PF04078; Rcd1; 1.
Family and domain databasesSUPFAM SSF48371; SSF48371; 1.
PTM databasesPhosphoSite Q92600; -.
Protein-protein interaction databasesBioGrid 114573; 24.
Protein-protein interaction databasesDIP DIP-46840N; -.
Protein-protein interaction databasesIntAct Q92600; 7.
Protein-protein interaction databasesMINT MINT-1162783; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000273064; -.
Enzyme and pathway databasesReactome REACT_20514; Deadenylation of mRNA.
3D structure databasesPDB 2FV2; X-ray; 2.20 A; A/B/C/D=18-285.
3D structure databasesPDB 4CRU; X-ray; 1.65 A; B=19-285.
3D structure databasesPDB 4CRV; X-ray; 2.05 A; B=19-285.
3D structure databasesPDB 4CT6; X-ray; 2.10 A; B=18-285.
3D structure databasesPDB 4CT7; X-ray; 1.90 A; B=16-285.
3D structure databasesPDBsum 2FV2; -.
3D structure databasesPDBsum 4CRU; -.
3D structure databasesPDBsum 4CRV; -.
3D structure databasesPDBsum 4CT6; -.
3D structure databasesPDBsum 4CT7; -.
3D structure databasesProteinModelPortal Q92600; -.
3D structure databasesSMR Q92600; 16-284.
Protocols and materials databasesDNASU 9125; -.
Phylogenomic databaseseggNOG COG5209; -.
Phylogenomic databasesGeneTree ENSGT00390000001225; -.
Phylogenomic databasesHOGENOM HOG000192069; -.
Phylogenomic databasesHOVERGEN HBG056785; -.
Phylogenomic databasesInParanoid Q92600; -.
Phylogenomic databasesKO K12606; -.
Phylogenomic databasesOrthoDB EOG7M98GN; -.
Phylogenomic databasesPhylomeDB Q92600; -.
Phylogenomic databasesTreeFam TF105734; -.
Organism-specific databasesCTD 9125; -.
Organism-specific databasesGeneCards GC02P219433; -.
Organism-specific databasesHGNC HGNC:10445; RQCD1.
Organism-specific databasesHPA HPA046622; -.
Organism-specific databasesMIM 612054; gene.
Organism-specific databasesneXtProt NX_Q92600; -.
Organism-specific databasesPharmGKB PA34859; -.
OtherChiTaRS RQCD1; human.
OtherEvolutionaryTrace Q92600; -.
OtherGenomeRNAi 9125; -.
OtherNextBio 34205; -.
OtherPRO PR:Q92600; -.



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