Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB






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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 6383
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories.
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000302190; ENSP00000307046; ENSG00000169439.
Genome annotation databasesGeneID 6383; -.
Genome annotation databasesKEGG hsa:6383; -.
Genome annotation databasesUCSC uc003yhv.1; human.
Sequence databasesCCDS CCDS6272.1; -.
Sequence databasesEMBL J04621; AAA52701.1; ALT_INIT; mRNA.
Sequence databasesEMBL AK025488; BAB15150.1; -; mRNA.
Sequence databasesEMBL AK074530; BAG51965.1; -; mRNA.
Sequence databasesEMBL AK097839; BAG53540.1; -; mRNA.
Sequence databasesEMBL CH471060; EAW91755.1; -; Genomic_DNA.
Sequence databasesEMBL BC030133; AAH30133.1; -; mRNA.
Sequence databasesEMBL BC049836; AAH49836.1; -; mRNA.
Sequence databasesPIR A33880; A33880.
Sequence databasesRefSeq NP_002989.2; NM_002998.3.
Sequence databasesUniGene Hs.1501; -.
Sequence databasesUniGene Hs.598247; -.
Polymorphism databasesDMDM 158962336; -.
Gene expression databasesBgee P34741; -.
Gene expression databasesCleanEx HS_SDC2; -.
Gene expression databasesExpressionAtlas P34741; baseline and differential.
Gene expression databasesGenevestigator P34741; -.
OntologiesGO GO:0005796; C:Golgi lumen; TAS:Reactome.
OntologiesGO GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
OntologiesGO GO:0043202; C:lysosomal lumen; TAS:Reactome.
OntologiesGO GO:0043025; C:neuronal cell body; IEA:Ensembl.
OntologiesGO GO:0005886; C:plasma membrane; TAS:Reactome.
OntologiesGO GO:0030165; F:PDZ domain binding; IPI:BHF-UCL.
OntologiesGO GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.
OntologiesGO GO:0030204; P:chondroitin sulfate metabolic process; TAS:Reactome.
OntologiesGO GO:0048813; P:dendrite morphogenesis; IEA:Ensembl.
OntologiesGO GO:0030198; P:extracellular matrix organization; TAS:Reactome.
OntologiesGO GO:0006024; P:glycosaminoglycan biosynthetic process; TAS:Reactome.
OntologiesGO GO:0006027; P:glycosaminoglycan catabolic process; TAS:Reactome.
OntologiesGO GO:0030203; P:glycosaminoglycan metabolic process; TAS:Reactome.
OntologiesGO GO:0007603; P:phototransduction, visible light; TAS:Reactome.
OntologiesGO GO:0048814; P:regulation of dendrite morphogenesis; ISS:UniProtKB.
OntologiesGO GO:0031000; P:response to caffeine; IEA:Ensembl.
OntologiesGO GO:0001666; P:response to hypoxia; IEA:Ensembl.
OntologiesGO GO:0001523; P:retinoid metabolic process; TAS:Reactome.
OntologiesGO GO:0044281; P:small molecule metabolic process; TAS:Reactome.
OntologiesGO GO:0042060; P:wound healing; IEA:Ensembl.
Proteomic databasesMaxQB P34741; -.
Proteomic databasesPaxDb P34741; -.
Proteomic databasesPRIDE P34741; -.
Family and domain databasesInterPro IPR003585; Neurexin-like.
Family and domain databasesInterPro IPR001050; Syndecan.
Family and domain databasesInterPro IPR027789; Syndecan/Neurexin_dom.
Family and domain databasesPANTHER PTHR10915; PTHR10915; 1.
Family and domain databasesPfam PF01034; Syndecan; 1.
Family and domain databasesPROSITE PS00964; SYNDECAN; 1.
Family and domain databasesSMART SM00294; 4.1m; 1.
PTM databasesPhosphoSite P34741; -.
Protein-protein interaction databasesBioGrid 112285; 28.
Protein-protein interaction databasesDIP DIP-29943N; -.
Protein-protein interaction databasesIntAct P34741; 12.
Protein-protein interaction databasesMINT MINT-1536313; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000307046; -.
Enzyme and pathway databasesReactome REACT_120752; HS-GAG degradation.
Enzyme and pathway databasesReactome REACT_121248; HS-GAG biosynthesis.
Enzyme and pathway databasesReactome REACT_121408; A tetrasaccharide linker sequence is required for GAG synthesis.
Enzyme and pathway databasesReactome REACT_163942; Syndecan interactions.
Enzyme and pathway databasesReactome REACT_228085; EPHB-mediated forward signaling.
Enzyme and pathway databasesReactome REACT_24968; Retinoid metabolism and transport.
Enzyme and pathway databasesReactome REACT_267654; Defective EXT2 causes exostoses 2.
Enzyme and pathway databasesReactome REACT_267659; Defective B3GAT3 causes JDSSDHD.
Enzyme and pathway databasesReactome REACT_267674; Defective EXT1 causes exostoses 1, TRPS2 and CHDS.
Enzyme and pathway databasesReactome REACT_267711; Defective B4GALT7 causes EDS, progeroid type.
3D structure databasesProteinModelPortal P34741; -.
3D structure databasesSMR P34741; 170-201.
Protocols and materials databasesDNASU 6383; -.
Phylogenomic databaseseggNOG NOG85596; -.
Phylogenomic databasesGeneTree ENSGT00530000063116; -.
Phylogenomic databasesHOGENOM HOG000263414; -.
Phylogenomic databasesHOVERGEN HBG004501; -.
Phylogenomic databasesInParanoid P34741; -.
Phylogenomic databasesKO K16336; -.
Phylogenomic databasesOMA KMPAQTK; -.
Phylogenomic databasesOrthoDB EOG7GJ6G5; -.
Phylogenomic databasesPhylomeDB P34741; -.
Phylogenomic databasesTreeFam TF320463; -.
Organism-specific databasesCTD 6383; -.
Organism-specific databasesGeneCards GC08P097575; -.
Organism-specific databasesHGNC HGNC:10659; SDC2.
Organism-specific databasesHPA CAB025123; -.
Organism-specific databasesHPA HPA044416; -.
Organism-specific databasesMIM 142460; gene.
Organism-specific databasesneXtProt NX_P34741; -.
Organism-specific databasesPharmGKB PA35589; -.
ChemistryDrugBank DB00020; Sargramostim.
OtherChiTaRS SDC2; human.
OtherGeneWiki SDC2; -.
OtherGenomeRNAi 6383; -.
OtherNextBio 24788; -.
OtherPRO PR:P34741; -.

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