Cancer Cell Metabolism Gene Database

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 9871
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000280551; ENSP00000280551; ENSG00000150961. [O94855-1]
Genome annotation databasesGeneID 9871; -.
Genome annotation databasesKEGG hsa:9871; -.
Genome annotation databasesUCSC uc003ici.4; human. [O94855-1]
Genome annotation databasesUCSC uc003icj.4; human. [O94855-2]
Sequence databasesCCDS CCDS3710.1; -. [O94855-1]
Sequence databasesEMBL AF130464; AAD28756.2; -; mRNA.
Sequence databasesEMBL AB018298; BAA34475.2; ALT_INIT; mRNA.
Sequence databasesEMBL CH471229; EAW73656.1; -; Genomic_DNA.
Sequence databasesEMBL BC035761; AAH35761.1; -; mRNA.
Sequence databasesRefSeq NP_055637.2; NM_014822.2. [O94855-1]
Sequence databasesRefSeq XP_005263435.1; XM_005263378.1. [O94855-2]
Sequence databasesRefSeq XP_005263436.1; XM_005263379.1. [O94855-2]
Sequence databasesUniGene Hs.189641; -.
Gene expression databasesBgee O94855; -.
Gene expression databasesCleanEx HS_SEC24D; -.
Gene expression databasesExpressionAtlas O94855; baseline and differential.
Gene expression databasesGenevestigator O94855; -.
OntologiesGO GO:0030127; C:COPII vesicle coat; NAS:UniProtKB.
OntologiesGO GO:0005829; C:cytosol; TAS:Reactome.
OntologiesGO GO:0005789; C:endoplasmic reticulum membrane; TAS:Reactome.
OntologiesGO GO:0012507; C:ER to Golgi transport vesicle membrane; TAS:Reactome.
OntologiesGO GO:0000139; C:Golgi membrane; TAS:GOC.
OntologiesGO GO:0008270; F:zinc ion binding; IEA:InterPro.
OntologiesGO GO:0019886; P:antigen processing and presentation of exogenous peptide antigen via MHC class II; TAS:Reactome.
OntologiesGO GO:0002474; P:antigen processing and presentation of peptide antigen via MHC class I; TAS:Reactome.
OntologiesGO GO:0044267; P:cellular protein metabolic process; TAS:Reactome.
OntologiesGO GO:0048208; P:COPII vesicle coating; TAS:Reactome.
OntologiesGO GO:0006888; P:ER to Golgi vesicle-mediated transport; NAS:UniProtKB.
OntologiesGO GO:0001701; P:in utero embryonic development; IEA:Ensembl.
OntologiesGO GO:0006886; P:intracellular protein transport; IEA:InterPro.
OntologiesGO GO:0061024; P:membrane organization; TAS:Reactome.
OntologiesGO GO:0043687; P:post-translational protein modification; TAS:Reactome.
OntologiesGO GO:0018279; P:protein N-linked glycosylation via asparagine; TAS:Reactome.
OntologiesGO GO:0044281; P:small molecule metabolic process; TAS:Reactome.
Proteomic databasesMaxQB O94855; -.
Proteomic databasesPaxDb O94855; -.
Proteomic databasesPRIDE O94855; -.
Family and domain databasesGene3D 3.40.20.10; -; 1.
Family and domain databasesGene3D 3.40.50.410; -; 1.
Family and domain databasesInterPro IPR029006; ADF-H/Gelsolin-like_dom.
Family and domain databasesInterPro IPR007123; Gelsolin-like_dom.
Family and domain databasesInterPro IPR006900; Sec23/24_helical_dom.
Family and domain databasesInterPro IPR006896; Sec23/24_trunk_dom.
Family and domain databasesInterPro IPR012990; Sec23_24_beta_S.
Family and domain databasesInterPro IPR002035; VWF_A.
Family and domain databasesInterPro IPR006895; Znf_Sec23_Sec24.
Family and domain databasesPfam PF00626; Gelsolin; 1.
Family and domain databasesPfam PF08033; Sec23_BS; 1.
Family and domain databasesPfam PF04815; Sec23_helical; 1.
Family and domain databasesPfam PF04811; Sec23_trunk; 1.
Family and domain databasesPfam PF04810; zf-Sec23_Sec24; 1.
Family and domain databasesSUPFAM SSF53300; SSF53300; 1.
Family and domain databasesSUPFAM SSF81811; SSF81811; 1.
PTM databasesPhosphoSite O94855; -.
Protein-protein interaction databasesBioGrid 115204; 19.
Protein-protein interaction databasesIntAct O94855; 9.
Protein-protein interaction databasesMINT MINT-1184580; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000280551; -.
Enzyme and pathway databasesReactome REACT_121399; MHC class II antigen presentation.
Enzyme and pathway databasesReactome REACT_12507; COPII (Coat Protein 2) Mediated Vesicle Transport.
Enzyme and pathway databasesReactome REACT_147797; Regulation of cholesterol biosynthesis by SREBP (SREBF).
Enzyme and pathway databasesReactome REACT_75795; Antigen Presentation: Folding, assembly and peptide loading of class I MHC.
3D structure databasesPDB 3EFO; X-ray; 2.70 A; B=266-1032.
3D structure databasesPDB 3EG9; X-ray; 3.00 A; B=266-1032.
3D structure databasesPDBsum 3EFO; -.
3D structure databasesPDBsum 3EG9; -.
3D structure databasesProteinModelPortal O94855; -.
3D structure databasesSMR O94855; 263-1032.
Protocols and materials databasesDNASU 9871; -.
Phylogenomic databaseseggNOG COG5028; -.
Phylogenomic databasesGeneTree ENSGT00590000082962; -.
Phylogenomic databasesHOGENOM HOG000196365; -.
Phylogenomic databasesHOVERGEN HBG062229; -.
Phylogenomic databasesInParanoid O94855; -.
Phylogenomic databasesKO K14007; -.
Phylogenomic databasesOMA PMGGQSM; -.
Phylogenomic databasesOrthoDB EOG700877; -.
Phylogenomic databasesPhylomeDB O94855; -.
Phylogenomic databasesTreeFam TF300464; -.
Organism-specific databasesCTD 9871; -.
Organism-specific databasesGeneCards GC04M119643; -.
Organism-specific databasesH-InvDB HIX0004459; -.
Organism-specific databasesHGNC HGNC:10706; SEC24D.
Organism-specific databasesHPA HPA041626; -.
Organism-specific databasesMIM 607186; gene.
Organism-specific databasesneXtProt NX_O94855; -.
Organism-specific databasesPharmGKB PA35629; -.
OtherChiTaRS SEC24D; human.
OtherEvolutionaryTrace O94855; -.
OtherGeneWiki SEC24D; -.
OtherGenomeRNAi 9871; -.
OtherNextBio 37211; -.
OtherPRO PR:O94855; -.



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